The present disclosure provides a three-dimensional shape expression method and device thereof. The method includes following steps: extracting a hybrid type framework of a three-dimensional shape; obtaining a segmentation of the three-dimensional shape by segmenting the hybrid type framework; obtaining a sub-structure of the three-dimensional shape according to the segmentation of the three-dimensional shape; and establishing an expression of the three-dimensional shape by using a bag-of-words model according to the sub-structure of the three-dimensional shape. The embodiments of the present disclosure are capable to express a three-dimensional shape with an easy and high-efficient method.