A turbine fracturing system and a controlling method thereof, a controlling apparatus and a storage medium are provided. The turbine fracturing system includes: N turbine fracturing apparatuses, wherein each of the N turbine fracturing apparatuses comprises a turbine engine, and N is an integer greater than or equal to 2; a fuel gas supply apparatus connected to the N turbine engines, wherein the fuel gas supply apparatus is configured to supply fuel gas and distribute the fuel gas to the N turbine engines as gaseous fuel; and a fuel liquid supply apparatus connected to at least one of the N turbine engines and configured to supply liquid fuel to at least one of the N turbine engines in a case that at least one of a flow rate and a pressure of the fuel gas decreases.