A system and method for managing the contents of a medical storage container such as a tray that has a required inventory of medical articles. A Faraday cage enclosure is used to isolate, scan, and inventory the container. The container and each of the medical articles in the container have a respective RFID tag. A processor is programmed to retrieve the inventory list for the container based on its tag and compare the actual contents of the container according to their tags to the inventory list. Missing items and extra items are noted.