An intraoral scanner generates 2D images of a dental site and 3D intraoral scans of the dental site. The computing device receives the 2D images of the dental site and the 3D intraoral scans of the dental site from the intraoral scanner, generates a 3D model of the dental site based on the 3D intraoral scans of the dental site, and processes at least one of a) one or more of the 2D images of the dental site, b) one or more of the 3D intraoral scans of the dental site, or c) data from the 3D model of the dental site to identify one or more intraoral areas of interest (AOIs) at the dental site. The computing device determines a dental condition associated with the one or more intraoral AOIs, and determines a manner for scanning the one or more intraoral AOIs.