For providing a water filtration purifying apparatus and a method thereof, enabling to reduce the manufacturing costs of the apparatus as a whole, by combining a function of filtration and a function of separation/concentration, the filtration function and the separation/concentration are separated, in the structure thereof. Thus, since all sewage waters generated in respective filtration separators can be collected by only one (1) set of a magnetic separator, even if there are plural number of the filtration separators, it is possible to dissolve a problem of rising up the costs of the apparatus, as a whole. With this, it is possible to provide a water filtration purifying apparatus, for enabling high water-quality purification and also reducing low manufacturing costs thereof, by further small-sizing the magnetic separating portion.