Tools in a system for the design of customized three-dimensional models of dental restorations for subsequent manufacturing. Dental restorations such as implant abutments, copings, crowns, wax-ups, bridge frameworks. Moreover, a computer-readable medium for implementing such a system on a computer. A system for designing at least one dental restoration, said system including: a display, means for acquiring and displaying a three dimensional dental restoration model of the dental restoration, and means for displaying a plurality of control points, each of the control points corresponding to a respective location on the dental restoration model, and each of said control points enabling manual customization of the dental restoration model.