A welding system of cylindrical structures which welds a welding end surface of an upper cylindrical structure and that of a lower one in an axial direction thereof, includes: two or more welding apparatuses opposite to the welding end surfaces and disposed at equal arrangement intervals in the circumferential direction thereof; a moving device configured to rotate the upper and lower cylindrical structures relative to the welding apparatuses in a circumferential direction thereof; and a control device configured to control the welding apparatuses and the moving device. The welding apparatus has a filler metal and a heating source therefor, and melts and fuses the filler metal on the welding end surfaces to weld them, and the control device is configured to continuously rotate the upper and lower cylindrical structures an angle of the arrangement interval by the moving device, while welding the welding end surfaces with the welding apparatuses.