An apparatus and method for diagnosing analysis is provided. The apparatus includes an analytic layer to divide a peripheral space of a target component into a plurality of cells and to derive analytic data by performing a numerical analysis iteration according to computational fluid dynamics for the plurality of cells; a model layer to derive an analytic model that simulates the numerical analysis iteration; a predictive layer to derive predictive data by predicting a result of the numerical analysis iteration by using the analytic model; and a diagnostic layer to diagnose an abnormality condition of numerical analysis by comparing the analytic data and predictive data during the numerical analysis iteration performed by the analytic layer. The diagnostic layer includes an early alarm to generate early alarm information by sorting a cell satisfying an early alarm condition; and an abnormality diagnostic device to determine whether the numerical analysis iteration is abnormal.