A system for controlling a flow rate of a fluid through a valve is provided. The system includes a valve and an actuator. An actuator drive device is driven by an actuator motor and is coupled to the valve for driving the valve between multiple positions. The system further includes a flow rate sensor configured to measure the flow rate of the fluid through the valve and a controller that is communicably coupled with the flow rate sensor. The controller is configured to receive a flow rate measurement from the flow rate sensor, adjust a control deadband based on an actuator command history, and determine a compensated position setpoint using the flow rate measurement, the adjusted control deadband, and a proportional variable deadband control technique. The controller is further configured to operate the motor to drive the drive device to the compensated actuator position setpoint.