The present disclosure is generally directed towards a clean drain system. The clean drain system includes drain stopper system, a seal, and a flange. The seal is coupled to the flange. The drain stopper system is positioned through the seal. The drain stopper system further includes a drain cover, a drain housing, and a basket. The drain cover along a vertical axis to allow or prevent the flow of water through the tailpipe. The basket includes a plurality of openings. The basket is configured to catch debris as it flows downward through the drain to prevent the drain from clogging. The clean drain system further includes an overflow cover, an overflow tube, and a collar. The collar is positioned around the drain housing. The overflow cover is coupled to the overflow tube. The collar is coupled to another end of the overflow tube.