To protect a drive unit in a fluid valve assembly from impurities over a long term by preventing entrance of such impurities to the drive unit, a seal structure the sealing performance of which is hardly reduced is adopted around a moving part of the fluid valve assembly. The fluid valve assembly is provided with a valve member displaceably arranged in a flow passage through which a fluid is allowed to pass, a drive unit arranged outside the flow passage, a connecting member extending through a bore formed in a wall of the flow passage and connected at its end thereof to the valve member and at its opposite end to the drive unit, and a seal member arranged in gas- or water-tight relations with the wall of the flow passage and the connecting member and made of a flexible material such that the seal member does not interfere with a displacement of the valve member when the valve member is driven by the drive unit.