Methods and apparatus are provided for aligning a control reference axis with a magnetic north of a permanent magnet motor. The method includes the steps of injecting a predetermined stator current on an estimated reference axis of the permanent magnet motor and introducing predetermined error on the estimated reference axis. The method further includes the steps of determining if a speed of the permanent magnet motor is greater than a predetermined threshold speed and setting the control reference axis to 180° added to the estimated reference axis if the speed of the permanent magnet motor is greater than the predetermined threshold speed or setting the control reference axis to the estimated reference axis if the speed of the permanent magnet motor is less than or equal to the predetermined threshold speed.