There is provided a medical image processing apparatus including an image-extracting section extracting a frame image from in vivo motion picture data picked up by an in vivo image pickup device or a plurality of consecutively picked-up still image data, and an image analysis section analyzing the frame image extracted by the image-extracting section to output an image analysis result. The image analysis section includes a first biological-feature detection section detecting a first biological feature, a second biological-feature detection section detecting, based on a detection result obtained by the first biological feature detection section, a second biological feature in a frame image picked up temporally before or after the image used for detection by the first biological feature detection section; and a condition determination section making a determination for a biological condition based on a detection result obtained by the second biological feature detection section to output the determination.