公开(公告)号：US20210057090A1

公开(公告)日：2021-02-25

申请号：US16945052

申请日：2020-07-31

Applicant: LIFE TECHNOLOGIES CORPORATION

Inventor： Jing Gao ,  Vidya KUDLINGAR ,  Dhirendrakumar RAI

IPC: G16H40/63 ,  G06F21/62 ,  G16B30/10 ,  G16B50/00 ,  G16H40/40 ,  G16H40/67 ,  C12Q1/6869

Abstract: Methods and systems that use cloud-based resources and assay definition files for a local server system to control a sequencing device and process sequencing data resulting from a sequencing run for an assay are described. A method may include receiving, at a local server system, an assay definition file from a server of a cloud computing and storage system. The assay definition file may include code modules for configuring an assay. The code modules may be stored in a memory of the local server system. The server system may receive sequencing data from a sequencing device. The sequencing device may produce the sequencing data during a sequencing run performed for the assay. The server system may apply an analysis pipeline for the assay to the sequencing data. The analysis pipeline includes analysis steps executed in accordance with the code modules from the assay definition file to produce assay analysis results.