Method and apparatus for compressing and decompressing genetic information obtained by using next generation sequencing (NGS)
    1.
    发明授权
    Method and apparatus for compressing and decompressing genetic information obtained by using next generation sequencing (NGS) 有权
    用于压缩和解压缩通过使用下一代测序(NGS)获得的遗传信息的方法和装置

    公开(公告)号:US09098523B2

    公开(公告)日:2015-08-04

    申请号:US13715908

    申请日:2012-12-14

    CPC classification number: G06F17/30153 G06F19/22 G06F19/28

    Abstract: Provided are methods and apparatuses for compressing genetic information, the methods and apparatuses obtaining read information about reads and alignment information about positions of the reads that are aligned to a reference sequence, and generating a compressed file comprising information about an address of a block corresponding to the aligned reads. Also, a method and apparatus for decompressing genetic information obtains a compressed file with respect to the genetic information, determines an address of a block corresponding to input gene search information, from the compressed file, and selectively decompresses genetic information corresponding to the determined address.

    Abstract translation: 提供了用于压缩遗传信息的方法和装置,获得关于与参考序列对准的读取的位置的读取和对齐信息的读取信息的方法和装置,以及生成压缩文件,该压缩文件包括关于对应于 对齐的读数。 此外,用于解压缩遗传信息的方法和装置获得关于遗传信息的压缩文件,从压缩文件中确定与输入基因检索信息相对应的块的地址,并且选择性地解压缩与确定的地址相对应的遗传信息。

    METHOD AND APPARATUS FOR COMPRESSING AND DECOMPRESSING GENETIC INFORMATION OBTAINED BY USING NEXT GENERATION SEQUENCING (NGS)
    2.
    发明申请
    METHOD AND APPARATUS FOR COMPRESSING AND DECOMPRESSING GENETIC INFORMATION OBTAINED BY USING NEXT GENERATION SEQUENCING (NGS) 有权
    用于压缩和分解使用下一代序列(NGS)获得的遗传信息的方法和装置

    公开(公告)号:US20130204851A1

    公开(公告)日:2013-08-08

    申请号:US13715908

    申请日:2012-12-14

    CPC classification number: G06F17/30153 G06F19/22 G06F19/28

    Abstract: Provided are methods and apparatuses for compressing genetic information, the methods and apparatuses obtaining read information about reads and alignment information about positions of the reads that are aligned to a reference sequence, and generating a compressed file comprising information about an address of a block corresponding to the aligned reads. Also, a method and apparatus for decompressing genetic information obtains a compressed file with respect to the genetic information, determines an address of a block corresponding to input gene search information, from the compressed file, and selectively decompresses genetic information corresponding to the determined address.

    Abstract translation: 提供了用于压缩遗传信息的方法和装置,获得关于与参考序列对准的读取的位置的读取和对齐信息的读取信息的方法和装置,以及生成压缩文件,该压缩文件包括关于对应于 对齐的读数。 此外,用于解压缩遗传信息的方法和装置获得关于遗传信息的压缩文件,从压缩文件中确定与输入基因检索信息相对应的块的地址,并且选择性地解压缩与确定的地址相对应的遗传信息。

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