A compressor that vibrates a rotary shaft or changes an operating frequency of a motor, in response to a vibration frequency of a discharge passage falling outside of a normal range. The compressor may include one or more impeller configured to draw in and compress refrigerant; a motor configured to rotate the one or more impeller; a rotary shaft, to which the one or more impeller and the motor are coupled; at least two thrust bearings that limit vibration of the rotary shaft; a vibration measuring sensor configured to measure a vibration frequency of a discharge passage; and a controller configured to control the at least two thrust bearings based on the vibration frequency. Upon determining that the vibration frequency falls outside of a normal vibration frequency range, the controller controls the at least two thrust bearings to vibrate the rotary shaft a predetermined number of times.