A retina image template matching method is based on the registration and comparison between the images captured with portable low-cost fundus cameras (e.g., a consumer grade camera typically incorporated into a smartphone or tablet computer) and a baseline image. The method solves the challenges posed by registering small and low-quality retinal template images captured with such cameras. Our method combines dimension reduction methods with a mutual information (MI) based image registration technique. In particular, principle components analysis (PCA) and optionally block PCA are used as a dimension reduction method to localize the template image coarsely to the baseline image, then the resulting displacement parameters are used to initialize the MI metric optimization for registration of the template image with the closest region of the baseline image.