- 专利标题: HIGH-RESOLUTION SPATIAL TRANSCRIPTOME
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申请号: US18281693申请日: 2022-03-11
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公开(公告)号: US20240158854A1公开(公告)日: 2024-05-16
- 发明人: Liangcai Gu , Xiaonan Fu , Shin Lin , Li Sun
- 申请人: University of Washington
- 申请人地址: US WA Seattle
- 专利权人: University of Washington
- 当前专利权人: University of Washington
- 当前专利权人地址: US WA Seattle
- 国际申请: PCT/US2022/020028 2022.03.11
- 进入国家日期: 2023-09-12
- 主分类号: C12Q1/6881
- IPC分类号: C12Q1/6881 ; C08F222/38 ; C08J3/075 ; C08K3/30 ; C08K5/17 ; C08K5/20 ; C12N15/10 ; C12Q1/48 ; C12Q1/6806 ; C12Q1/6844 ; G16B30/20 ; G16B45/00
摘要:
Example spatial transcriptomics techniques use “continuous” polony arrays on a customized gel surface for spatial barcoding. By screening polyacrylamide (PAA) gel fabrication conditions, polonies formed on a crosslinked PAA gel were shown to exhibit a continuous, homogenous DNA distribution, which is highly suited for tissue barcoding applications. Compared with widely used polonies formed in flow cells that utilize linear PAA gels, continuous polonies showed efficient DNA amplification and restriction digestion to generate capture oligo arrays, which have a significantly better spatial RNA capturing performance. In addition, the crosslinked PAA gel showed sufficient constraints on lateral RNA diffusion and provides better mechanical strength and stability for tissue mapping assays than a semifluidic linear PAA gel used by previous methods.
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