A method and system for utilizing a digital filter for actuator positioning control in a disk device. In accordance with the method and system of the present invention multiple selectable filter modules are provided. Each of the multiple selectable filter modules functions in a serial or parallel filtering mode when selected. Multiple configurable registers are also provided wherein the configuration of each of the multiple configurable registers determines a selection of at least one of the multiple selectable filter modules. Particular ones of the multiple configurable registers are selected, such that a configuration of the digital filter is dynamically selectable in order to achieve a predetermined filter output.