A lithography stepper alignment and control method, comprising: providing a test template having a plurality of field sizes, and deriving a set of overlay values for each field size (S1); calculating a set of compensation amounts for the overlay value of each field size (S2); and, comparing a set of estimated alignment compensation values for a product with each compensation amount for each field size, selecting as the product alignment compensation values the set of compensation amounts of a field size closest to the set of estimated alignment compensation values, and, using the product alignment compensation values to perform alignment compensation on said product (S3).