BASE SEQUENCE RETRIEVAL APPARATUS
    1.
    发明公开
    BASE SEQUENCE RETRIEVAL APPARATUS 审中-公开
    BASENSEQUENZ-ABRUFVORRICHTUNG

    公开(公告)号:EP1732022A1

    公开(公告)日:2006-12-13

    申请号:EP05727509.1

    申请日:2005-03-31

    IPC分类号: G06F19/00 G06F17/30

    CPC分类号: G06F19/22 G06F19/18

    摘要: An apparatus, method, etc. that in designing of the base sequence of, for example, siRNA, realize high-speed retrieval any genes containing analogous base sequences without omission. Accordingly, retrieval is carried out in such a manner that two partial sequences of given length and any extra part arc identified from inputted base sequences, and that hamming distance being the number of corresponding bases incompatible with each other is divided and assigned to the partial sequences and extra part and out of the two partial sequences, one with an assigned number not greater is selected and retrieved.

    摘要翻译: 在设计例如siRNA的碱基序列中的装置,方法等实现高速检索任何含有类似碱基序列而不被遗漏的基因。 因此,以从输入的基本序列识别给定长度和任何额外部分的两个部分序列进行检索,并且将彼此不相容的相应基数的汉明距离划分并分配给部分序列 并且选择和检索两个部分序列中的额外部分和一个具有不大于分配数量的部分序列。

    METHOD OF SEARCHING SPECIFIC BASE SEQUENCE
    2.
    发明公开
    METHOD OF SEARCHING SPECIFIC BASE SEQUENCE 审中-公开
    VERFAHREN ZUM DURCHSUCHEN EINER SPEZIFISCHEN BASENSEQUENZ

    公开(公告)号:EP1732021A1

    公开(公告)日:2006-12-13

    申请号:EP05721340.7

    申请日:2005-03-23

    摘要: It is intended to efficiently determine a base sequence specifically appearing in an expression gene. For this, providing that the expression gene consists of exons (301)...(306) and especially that exon (301) is united with exon (302) and exon (302) with exon (303), an aggregate of base sequences (401) (403) being a union of exon base sequences (301)...(305) and a boundary base sequence obtained by uniting together base sequences(404) and (405) and base sequences (406) and (407) respectively existing over boundaries between exon (301) and exon (302) and between exon (302) and exon (303) is formed, and the aggregate is searched. If a base sequence is one specifically appearing in the expression gene, the number of search results is 1 and otherwise, the number is plural.

    摘要翻译: 旨在有效地确定特异性出现在表达基因中的碱基序列。 为此,提供表达基因由外显子(301)...(306)组成,特别是外显子(301)与外显子(302)和外显子(302)与外显子(303)结合,碱基序列 (401)(403)是通过将基本序列(404)和(405)以及碱基序列(406)和(407)组合在一起而获得的外显子碱基序列(301)...(305)和边界碱基序列 分别存在于外显子(301)和外显子(302)之间以及外显子(302)和外显子(303)之间的边界上,并且搜索聚集体。 如果碱基序列是表达基因中特定出现的碱基序列,则搜索结果数为1,否则为数。