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公开(公告)号:EP3004378A1
公开(公告)日:2016-04-13
申请号:EP14725498.1
申请日:2014-05-22
发明人: MEULEMAN, Wouter
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6869 , C12Q2521/319 , C12Q2521/525 , C12Q2565/631
摘要: A method for determining the sequence of a target nucleic acid, including steps of contacting a target nucleic acid with a polymerase to sequentially remove nucleotide triphosphates from the target nucleic acid, wherein the nucleotide triphosphates that are removed have a variety of different base moieties; and distinguishing the different base moieties for the nucleotide triphosphates that are removed. Also provided is a apparatus including a nanopore positioned in a fluid impermeable barrier to form a passage through which a nucleotide triphosphate can pass from a first fluid reservoir to a second fluid reservoir, and a reaction mix in the first fluid reservoir that includes a polymerase, target nucleic acid having two strands, and pyrophosphoro lytic concentration of pyrophosphate.
摘要翻译: 一种用于确定靶核酸序列的方法,包括使目标核酸与聚合酶接触以顺序地从靶核酸中除去核苷酸三磷酸的步骤,其中被去除的三磷酸核苷酸具有多种不同的碱基部分; 并区分去除的三磷酸核苷酸的不同碱基部分。 还提供了一种装置,其包括定位在流体不可渗透屏障中的纳米孔,以形成三磷酸核苷从第一流体储存器传递到第二流体储存器的通道,以及包括聚合酶的第一流体储存器中的反应混合物, 具有两条链的靶核酸和焦磷酸焦磷酸浓度。
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公开(公告)号:EP3825415A1
公开(公告)日:2021-05-26
申请号:EP20183774.7
申请日:2014-05-22
发明人: MEULEMAN, Wouter
IPC分类号: C12Q1/6869
摘要: A method for determining the sequence of a target nucleic acid, including steps of contacting a target nucleic acid with a polymerase which is associated with a nanopore to sequentially remove nucleotide triphosphates from the target nucleic acid by pyrophosphorolysis; and distinguishing the different base moieties for the nucleotide triphosphates that are removed wherein the base moieties are distinguished by a change in current in the nanopore.
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公开(公告)号:EP3207134A2
公开(公告)日:2017-08-23
申请号:EP15797490.8
申请日:2015-10-16
发明人: STEEMERS, Frank J. , GUNDERSON, Kevin L. , ZHANG, Fan , BETLEY, Jason Richard , GORMLEY, Niall Anthony , MEULEMAN, Wouter , WEIR, Jacqueline , IOANNOU, Avgousta , JENKINS, Gareth , JACKSON, Rosamond , MORRELL, Natalie , POKHOLOK, Dmitry K. , NORBERG, Steven J. , HE, Molly , KIA, Amirali , GORYSHIN, Igor , PANTOJA, Rigo
IPC分类号: C12N15/10
CPC分类号: C12N15/1093 , C12N15/1065 , C12Q2525/191 , C12Q2563/179 , C12Q2565/514
摘要: Embodiments provided herein relate to methods and compositions for preparing an immobilized library of barcoded DNA fragments of a target nucleic acid, identifying genomic variants, determining the contiguity information, phasing information, and methylation status of the target nucleic acid.
摘要翻译: 本文提供的实施方案涉及用于制备靶核酸的条形码化DNA片段的固定文库,鉴定基因组变体,确定靶核酸的邻接信息,定相信息和甲基化状态的方法和组合物。
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公开(公告)号:EP3351645B1
公开(公告)日:2020-07-15
申请号:EP17207528.5
申请日:2014-05-22
发明人: MEULEMAN, Wouter
IPC分类号: C12Q1/6869
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公开(公告)号:EP3207134B1
公开(公告)日:2019-07-03
申请号:EP15797490.8
申请日:2015-10-16
发明人: STEEMERS, Frank J. , GUNDERSON, Kevin L. , ZHANG, Fan , BETLEY, Jason Richard , GORMLEY, Niall Anthony , MEULEMAN, Wouter , WEIR, Jacqueline , IOANNOU, Avgousta , JENKINS, Gareth , JACKSON, Rosamond , MORRELL, Natalie , POKHOLOK, Dmitry K. , NORBERG, Steven J. , HE, Molly , KIA, Amirali , GORYSHIN, Igor , PANTOJA, Rigo
IPC分类号: C12N15/10
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公开(公告)号:EP3004378B1
公开(公告)日:2017-12-20
申请号:EP14725498.1
申请日:2014-05-22
发明人: MEULEMAN, Wouter
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6869 , C12Q2521/319 , C12Q2521/525 , C12Q2565/631
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公开(公告)号:EP3636757A1
公开(公告)日:2020-04-15
申请号:EP19183798.8
申请日:2015-10-16
发明人: STEEMERS, Frank J. , GUNDERSON, Kevin L. , ZHANG, Fan , BETLEY, Jason Richard , GORMLEY, Niall Anthony , MEULEMAN, Wouter , WEIR, Jacqueline , IOANNOU, Avgousta , JENKINS, Gareth , JACKSON, Rosamond , MORRELL, Natalie , POKHOLOK, Dmitry K. , NORBERG, Steven J. , HE, Molly , KIA, Amirali , GORYSHIN, Igor , PANTOJA, Rigo
IPC分类号: C12N15/10
摘要: Embodiments provided herein relate to methods and compositions for preparing an immobilized library of barcoded DNA fragments of a target nucleic acid, identifying genomic variants, determining the contiguity information, phasing information, and methylation status of the target nucleic acid.
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公开(公告)号:EP3351645A1
公开(公告)日:2018-07-25
申请号:EP17207528.5
申请日:2014-05-22
发明人: MEULEMAN, Wouter
IPC分类号: C12Q1/6869
摘要: A method for determining the sequence of a target nucleic acid, including steps of contacting a target nucleic acid with a polymerase to sequentially remove nucleotide triphosphates from the target nucleic acid, wherein the nucleotide triphosphates that are removed have a variety of different base moieties; and distinguishing the different base moieties for the nucleotide triphosphates that are removed. Also provided is an apparatus including a nanopore positioned in a fluid impermeable barrier to form a passage through which a nucleotide triphosphate can pass from a first fluid reservoir to a second fluid reservoir, and a reaction mix in the first fluid reservoir that includes a polymerase, target nucleic acid having two strands, and pyrophosphorolytic concentration of pyrophosphate.
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