摘要:
The present invention addresses the problem of improving separation performance in separating a hybrid of a mutant-type DNA and a probe or/and a hybrid of a wild-type type DNA and a probe, said hybrids being obtained by the LH method. The present invention relates to "a method for detection of mutant-type DNA or/and wild-type DNA which comprises the following steps: (1) a step in which at least one of a single-stranded DNA having a substituted nucleotide, a deficient nucleotide region, or an inserted nucleotide region (mutant-type DNA), or/and a wild-type single-stranded DNA corresponding to the mutant-type DNA (wild-type DNA) is contacted with a probe hybridizing with both single-stranded DNAs, to form a hybrid with the mutant-type DNA (mutant-type hybrid) or/and a hybrid with the wild-type DNA (wild-type hybrid) (in this regard however, at least one of the obtained mutant-type hybrid and wild-type hybrid has a loop structure), (2) a step in which the obtained mutant-type hybrid or/and wild-type hybrid is contacted with an intercalator, and (3) a step in which the presence or absence of the mutant-type DNA or/and the wild-type DNA is detected by separating the conjugate of mutant-type hybrid and intercalator or/and the conjugate of wild-type hybrid and intercalator".
摘要:
The present invention relates to a method for detecting of a mutant DNA using a probe, comprising: (1) contacting a sample containing a single-stranded DNA which has a substituted nucleotide, a deleted nucleotide region, or an inserted nucleotide region (mutant-type DNA), or/and a wild-type single-stranded DNA (wild-type DNA) corresponding thereto with the probe which hybridizes with both single-stranded DNA, to form a hybrid with the mutant-type DNA (mutant-type hybrid) or/and a hybrid with a wild-type DNA (wild-type hybrid), wherein at least one of the obtained mutant-type hybrid and wild-type hybrid has the stem structure; (2) separating the obtained mutant-type hybrid or/and wild-type hybrid by electrophoresis on the basis of presence or absence of the stem structure or difference in the stem structure; and (3) detecting the presence or absence of the mutant-type DNA in the sample.
摘要:
An oligonucleotide which comprises a part or the entire of the nucleotide sequence depicted in SEQ ID NO:1, 2, 3 or 4 or a part or the entire of a sequence complementary to the nucleotide sequence and is capable of hybridizing with the nucleotide sequence for Mycobacterium kansasii gene; a primer and a probe for use in the detection of Mycobacterium kansasii comprising the oligonucleotide; and a method for detecting Mycobacterium kansasii using the primer and/or probe. The method for detecting Mycobacterium kansasii enables the detection of M. kansasii more rapidly and with higher accuracy compared with a conventional bacterium identification method performed by culture examination on a bacterium. Further, the method can exclude any false positive result for the diagnosis and can also detect and diagnose M. kansasii with higher accuracy compared with a diagnosis method performed by PCR using a conventional primer and/or probe. Still further, the method can quantify a M. kansasii cell.
摘要:
Novel probe and primer for tubercle bacillus detection capable of avoiding diagnostic false positive; and a simple and easy, rapid, high-precision method of detecting human tubercle bacillus with the use thereof. There is provided an oligonucleotide comprising a part or the entirety of a nucleic acid sequence of SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 7 or SEQ ID NO: 8 or comprising a part or the entirety of a sequence complementary thereto, which oligonucleotide is capable of hybridization with the nucleic acid sequence of IS6110 gene of human tubercle bacillus. Further, there are provided a probe and primer for tubercle bacillus detection, comprising the oligonucleotide. Still further, there is provided a method of detecting human tubercle bacillus, characterized in that use is made of the above probe and primer.