公开(公告)号：US11664089B2

公开(公告)日：2023-05-30

申请号：US16575277

申请日：2019-09-18

Applicant: SHARECARE AI, INC.

Inventor： Geert Trooskens ,  Wim Maria R. Van Criekinge

IPC: G06F16/00 ,  G16B30/00 ,  G16B40/00 ,  G16B10/00 ,  G06F16/22 ,  G16B20/20 ,  G16B45/00 ,  G16B20/40 ,  G16B5/00 ,  G16B40/10 ,  C12Q1/6827 ,  C12Q1/6869 ,  G06F17/18 ,  G16B50/00

CPC classification number: G16B30/00 ,  C12Q1/6827 ,  C12Q1/6869 ,  G06F16/2255 ,  G06F17/18 ,  G16B5/00 ,  G16B10/00 ,  G16B20/20 ,  G16B20/40 ,  G16B40/00 ,  G16B40/10 ,  G16B45/00 ,  G16B50/00

Abstract: The technology disclosed generates a reference array of variant data for locations that are shared between read results which are to be compared, and generates hashes over a selected pattern length of positions in the reference array to independently produce non-unique window hashes for base patterns in the read results. It then selects for comparison window hashes that occur less than a ceiling number of times and compares the selected window hashes to identify common window hashes between the read results. It then determines a similarity measure for the read results based on the common window hashes.

公开(公告)号：US11551784B2

公开(公告)日：2023-01-10

申请号：US16575278

申请日：2019-09-18

Applicant: SHARECARE AI, INC.

Inventor： Geert Trooskens ,  Wim Maria R. Van Criekinge

IPC: G16B30/00 ,  G16B40/00 ,  G16B10/00 ,  G06F16/22 ,  G16B20/20 ,  G16B45/00 ,  G16B20/40 ,  G16B5/00 ,  G16B40/10 ,  C12Q1/6827 ,  C12Q1/6869 ,  G06F17/18 ,  G16B50/00

Abstract: The technology disclosed generates a reference array of variant data for locations that are shared between read results which are to be compared, and generates hashes over a selected pattern length of positions in the reference array to independently produce non-unique window hashes for base patterns in the read results. It then selects for comparison window hashes that occur less than a ceiling number of times and compares the selected window hashes to identify common window hashes between the read results. It then determines a similarity measure for the read results based on the common window hashes.

公开(公告)号：US11984198B2

公开(公告)日：2024-05-14

申请号：US18152118

申请日：2023-01-09

Applicant: SHARECARE AI, INC.

Inventor： Geert Trooskens ,  Wim Maria R. Van Criekinge

IPC: G16B30/00 ,  C12Q1/6827 ,  C12Q1/6869 ,  G06F16/22 ,  G06F17/18 ,  G16B5/00 ,  G16B10/00 ,  G16B20/00 ,  G16B20/20 ,  G16B20/40 ,  G16B40/00 ,  G16B40/10 ,  G16B40/30 ,  G16B45/00 ,  G16B50/00 ,  H04L9/32

CPC classification number: G16B30/00 ,  C12Q1/6827 ,  C12Q1/6869 ,  G06F16/2255 ,  G06F17/18 ,  G16B5/00 ,  G16B10/00 ,  G16B20/20 ,  G16B20/40 ,  G16B40/00 ,  G16B40/10 ,  G16B45/00 ,  G16B50/00

Abstract: First and second sequenced outputs are accessed. The sequenced outputs contain variants occurring at different carriers and at different carrier positions. Hashes are generated over a selected pattern length of positions for those carrier positions that are shared between the sequenced outputs to produce window hashes for base patterns in first and second sequences. Each sequence is based on the shared carrier positions and the respective sequenced output. The window hashes are non-unique. Window hashes that occur less than a ceiling number times are selected. The selected window hashes are compared between the sequences on a starting position basis such that selected window hashes for base patterns having same start positions in the sequenced outputs are compared. Common window hashes are identified between the sequences based on the comparing. A similarity measure is determined between the sequences based on the common window hashes.

公开(公告)号：US11699504B2

公开(公告)日：2023-07-11

申请号：US16575276

申请日：2019-09-18

Applicant: SHARECARE AI, INC.

Inventor： Geert Trooskens ,  Wim Maria R. Van Criekinge

IPC: G06F16/00 ,  G16B30/00 ,  G16B40/00 ,  G16B10/00 ,  G06F16/22 ,  G16B20/20 ,  G16B45/00 ,  G16B20/40 ,  G16B5/00 ,  G16B40/10 ,  C12Q1/6827 ,  C12Q1/6869 ,  G06F17/18 ,  G16B50/00

CPC classification number: G16B30/00 ,  C12Q1/6827 ,  C12Q1/6869 ,  G06F16/2255 ,  G06F17/18 ,  G16B5/00 ,  G16B10/00 ,  G16B20/20 ,  G16B20/40 ,  G16B40/00 ,  G16B40/10 ,  G16B45/00 ,  G16B50/00

Abstract: The technology disclosed generates a reference array of variant data for locations that are shared between read results which are to be compared, and generates hashes over a selected pattern length of positions in the reference array to independently produce non-unique window hashes for base patterns in the read results. It then selects for comparison window hashes that occur less than a ceiling number of times and compares the selected window hashes to identify common window hashes between the read results. It then determines a similarity measure for the read results based on the common window hashes.