SYSTEMS AND METHODS FOR SPATIAL REFERENCE SEQUENCING

    公开(公告)号:WO2022226372A1

    公开(公告)日:2022-10-27

    申请号:PCT/US2022/026043

    申请日:2022-04-22

    Abstract: Provided herein are methods, systems, compositions, and kits that can determine spatial information between a plurality of analytes in a sample by tagging such analytes with tags, where identities and/or locations of such tags are previously unknown prior to tagging. Each of a plurality of analyte sequences may be tagged with multiple spatial tags, such that each analyte sequence is associated with a set of two or more spatial tags. The sets of spatial tags may be analyzed to generate a map of analyte sequences. The map may comprise information about the respective absolute positions of each of a set of sequences with respect to a reference sequence. The map may comprise information about the respective probability cloud (or likely location) of each of a set of sequences with respect to a reference sequence.

    SYNTHETIC NON-CODING RNAS
    6.
    发明申请

    公开(公告)号:WO2022070185A1

    公开(公告)日:2022-04-07

    申请号:PCT/IL2021/051172

    申请日:2021-09-29

    Abstract: Synthetic RNA molecules comprising at least two first RNA-binding protein (RBP)- binding motifs, at least two second RBP-binding motifs and at least two third RBP-binding motifs, wherein the at least two first RBP-binding motifs bind the same first RBP and comprise non-identical sequences are provided. Synthetic RNA molecules comprising at least two RBP-binding motifs, a regulatory element and an open reading frame wherein the RBP-binding motifs individually repress translation and cooperatively enhance translation of the open reading frame are also provided. Methods employing machine learning models to determine variant sequence binding to RBPs are also provided.

    METHOD AND PRODUCTS FOR PRODUCING FUNCTIONALISED SINGLE STRANDED OLIGONUCLEOTIDES

    公开(公告)号:WO2020161187A1

    公开(公告)日:2020-08-13

    申请号:PCT/EP2020/052868

    申请日:2020-02-05

    Abstract: The present invention relates to functionalised single stranded oligonucleotides and in particular to a method for producing functionalised single stranded oligonucleotides comprising: (a) providing a circular DNA molecule comprising an oligonucleotide sequence bordered by cleavage domains; (b) performing a rolling circle amplification (RCA) reaction with the circular DNA molecule of (a) as a template and one or more functionalised nucleotides (dNTPs); and (c) enzymatically cleaving the product of the RCA reaction at the cleavage domains to release the single stranded functionalised oligonucleotides.

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