The invention provides a three degree of freedom micro-vibration suppression platform and a control method thereof, belongs to vibration isolation and suppression devices, and solves problems of complicated structure and complex control method of a prior active-passive composite vibration isolation structure. The platform provided by the invention includes a base platform, a load platform, three sets of single degree of freedom active-passive composite vibration isolation assemblies which are totally identical and a controller. The upper end and the lower end of each single degree of freedom active-passive composite vibration isolation assembly are connected with the load platform and the base platform. The control method provided by the invention includes calculating logic axis translation signals, calculating logic axis control signals, calculating physical axis real time control signals and transmission steps. The platform provided by the invention is simple in structure, adjustable in rigidity, is capable of suppressing and isolating three degree of freedom microvibration in rotation directions of an X axis and a Y axis and a translation direction of a Z axis and is suitable for different occasions. Microvibration of different frequency bands can be dampened effectively and reliable guarantee can be provided for precision machining and measurement equipment in a microvibration environment.