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    Three-dimensional orientation indicator and controller
    1.
    发明申请
    Three-dimensional orientation indicator and controller 失效
    三维方位指示器和控制器

    公开(公告)号：US20080238916A1

    公开(公告)日：2008-10-02

    申请号：US11729211

    申请日：2007-03-28

    申请人： Anirban Ghosh ,  Igor Mordatch ,  Azam Khan ,  George William Fitzmaurice ,  Justin Frank Matejka ,  Ryan M. Schmidt ,  Gordon P. Kurtenbach

    发明人： Anirban Ghosh ,  Igor Mordatch ,  Azam Khan ,  George William Fitzmaurice ,  Justin Frank Matejka ,  Ryan M. Schmidt ,  Gordon P. Kurtenbach

    IPC分类号： G06T15/00

    CPC分类号： G06T15/20 ,  G06F3/04815 ,  G06F2203/04802 ,  G06T19/00

    摘要： A method, apparatus, and article of manufacture provide the ability to control a three-dimensional scene view. A three-dimensional (3D) scene having one or more three-dimensional objects is displayed. A 3D representation of a coordinate system of the scene is displayed. The 3D representation contains a current viewpoint, one or more faces, one or more edges, and one or more corners with each face, edge, and corner representing a corresponding viewpoint of the scene. The 3D representation is manipulated. A new current viewpoint of the 3D representation is displayed based on the manipulation. The scene is then reoriented corresponding to the new current viewpoint based on the manipulation of the 3D representation.

    摘要翻译： 方法，装置和制品提供了控制三维场景视图的能力。 显示具有一个或多个三维物体的三维（3D）场景。 显示场景的坐标系的3D表示。 3D表示包含当前视点，一个或多个面，一个或多个边，以及一个或多个角，其中每个面，边和角表示场景的相应视点。 操纵3D表示。 基于操作显示3D表示的新的当前视点。 然后基于3D表示的操纵，对应于新的当前视点重新定向场景。

    ANNOTATING DESCRIPTIONS OF CHEMICAL COMPOUNDS
    3.
    发明申请
    ANNOTATING DESCRIPTIONS OF CHEMICAL COMPOUNDS 有权
    化学化合物的说明

    公开(公告)号：US20080234996A1

    公开(公告)日：2008-09-25

    申请号：US11869677

    申请日：2007-10-09

    申请人： Anirban Ghosh ,  Nagasuma Chandra ,  Kala Balasubramanian

    发明人： Anirban Ghosh ,  Nagasuma Chandra ,  Kala Balasubramanian

    IPC分类号： G06G7/48

    CPC分类号： G06F19/706 ,  G06F19/16 ,  G06F19/705 ,  G06F19/708

    摘要： A one-dimensional structural description of a ligand molecule can be annotated to include, for one or more atoms, information from a force field database. The information can be provided by an Assisted Model Building and Energy Refinement parameter list or a similar source. The annotation can be carried out using one or more intermediate structural description formats and can include identifying one or more fragment types that make up the ligand molecule.

    摘要翻译： 可以注释配体分子的一维结构描述，以对于一个或多个原子包括来自力场数据库的信息。 信息可以通过辅助模型构建和能量精化参数列表或类似的来源提供。 注释可以使用一种或多种中间结构描述形式进行，并且可以包括鉴定构成配体分子的一种或多种片段类型。

    LIGAND IDENTIFICATION AND MATCHING SOFTWARE TOOLS
    4.
    发明申请
    LIGAND IDENTIFICATION AND MATCHING SOFTWARE TOOLS 有权
    配对识别和匹配软件工具

    公开(公告)号：US20080234135A1

    公开(公告)日：2008-09-25

    申请号：US11869672

    申请日：2007-10-09

    申请人： Anirban Ghosh ,  Nagasuma Chandra

    发明人： Anirban Ghosh ,  Nagasuma Chandra

    IPC分类号： C40B20/00 ,  C40B30/02 ,  C40B60/12

    CPC分类号： G06F19/706 ,  G06F19/16 ,  G06F19/705 ,  G06F19/708

    摘要： Using annotated structural descriptions and binding data for two, four or more input ligand molecules known to bind to a given protein target, a profile of the ligand molecules can be created by identifying patches of ligand molecules which have similar chemical and/or stereochemical descriptions, scored with the use of a weight dataset (e.g., substitution matrix). A database containing annotated molecular descriptions can be searched according to the profile to identify, for example, additional ligands that can bind to the protein target. Information such as the input ligands, the additional ligands, and literature related to these molecules, and modeling tools can be displayed in a user interface.

    摘要翻译： 使用已知结合给定蛋白质靶标的两个，四个或更多个输入配体分子的注释结构描述和结合数据，可以通过鉴定具有类似化学和/或立体化学描述的配体分子的片段来产生配体分子的分布， 使用权重数据集（例如替代矩阵）得分。 可以根据配置文件搜索包含注释分子描述的数据库，以鉴定例如可以结合蛋白质靶标的其它配体。 诸如输入配体，附加配体和与这些分子相关的文献的信息以及建模工具可以显示在用户界面中。

    Annotating descriptions of chemical compounds
    5.
    发明授权
    Annotating descriptions of chemical compounds 有权
    注释化学化合物的描述

    公开(公告)号：US08468002B2

    公开(公告)日：2013-06-18

    申请号：US11869677

    申请日：2007-10-09

    申请人： Anirban Ghosh ,  Nagasuma Chandra ,  Kala Balasubramanian

    发明人： Anirban Ghosh ,  Nagasuma Chandra ,  Kala Balasubramanian

    IPC分类号： G06G7/58

    CPC分类号： G06F19/706 ,  G06F19/16 ,  G06F19/705 ,  G06F19/708

    摘要： A one-dimensional structural description of a ligand molecule can be annotated to include, for one or more atoms, information from a force field database. The information can be provided by an Assisted Model Building and Energy Refinement parameter list or a similar source. The annotation can be carried out using one or more intermediate structural description formats and can include identifying one or more fragment types that make up the ligand molecule.

    摘要翻译： 可以注释配体分子的一维结构描述，以对于一个或多个原子包括来自力场数据库的信息。 信息可以通过辅助模型构建和能量精化参数列表或类似的来源提供。 注释可以使用一种或多种中间结构描述形式进行，并且可以包括鉴定构成配体分子的一种或多种片段类型。

    Ligand identification and matching software tools
    6.
    发明授权
    Ligand identification and matching software tools 有权
    配体识别和配套软件工具

    公开(公告)号：US08468001B2

    公开(公告)日：2013-06-18

    申请号：US11869672

    申请日：2007-10-09

    申请人： Anirban Ghosh ,  Nagasuma Chandra

    发明人： Anirban Ghosh ,  Nagasuma Chandra

    IPC分类号： G06G7/58

    CPC分类号： G06F19/706 ,  G06F19/16 ,  G06F19/705 ,  G06F19/708

    摘要： Using annotated structural descriptions and binding data for two, four or more input ligand molecules known to bind to a given protein target, a profile of the ligand molecules can be created by identifying patches of ligand molecules which have similar chemical and/or stereochemical descriptions, scored with the use of a weight dataset (e.g., substitution matrix). A database containing annotated molecular descriptions can be searched according to the profile to identify, for example, additional ligands that can bind to the protein target. Information such as the input ligands, the additional ligands, and literature related to these molecules, and modeling tools can be displayed in a user interface.

    摘要翻译： 使用已知结合给定蛋白质靶标的两个，四个或更多个输入配体分子的注释结构描述和结合数据，可以通过鉴定具有类似化学和/或立体化学描述的配体分子的片段来产生配体分子的分布， 使用权重数据集（例如替代矩阵）得分。 可以根据配置文件搜索包含注释分子描述的数据库，以鉴定例如可以结合蛋白质靶标的其它配体。 诸如输入配体，附加配体和与这些分子相关的文献的信息以及建模工具可以显示在用户界面中。

    SYSTEM AND METHOD FOR MANAGING INFORMATION OF BIOLOGICAL ENTITIES
    7.
    发明申请
    SYSTEM AND METHOD FOR MANAGING INFORMATION OF BIOLOGICAL ENTITIES 有权
    用于管理生物实体信息的系统和方法

    公开(公告)号：US20130013623A1

    公开(公告)日：2013-01-10

    申请号：US13366810

    申请日：2012-02-06

    申请人： Ajay Shah ,  Srinivas Bolisetty ,  Xian-Wei Meng ,  Ali G. Ozkabak ,  Anirban Ghosh ,  Kirti Jindal ,  Krutin Boloor ,  Ramesh Balakrishnan ,  Manas Ajith Khare ,  Parag Sangoi

    发明人： Ajay Shah ,  Srinivas Bolisetty ,  Xian-Wei Meng ,  Ali G. Ozkabak ,  Anirban Ghosh ,  Kirti Jindal ,  Krutin Boloor ,  Ramesh Balakrishnan ,  Manas Ajith Khare ,  Parag Sangoi

    IPC分类号： G06F17/30

    CPC分类号： G06F17/30595 ,  G06F19/12

    摘要： A system and method for managing, tracking and recording one or more biological process inputs, outputs and their derived forms is provided. The inputs pertaining to the biological process inputs, outputs and their derived forms are received and processed. The inputs include information related to the biological processes and the biological process inputs, outputs and their derived forms. The inputs further include information related to modifications in the biological process inputs, outputs and their derived forms. The inputs also include outputs of the biological processes. The inputs are processed by modifying the received inputs into a predefined format. Thereafter, the received inputs and processed inputs are stored. The stored inputs are accessed for managing, tracking and recording the biological processes, biological process inputs, outputs and their derived forms.

    摘要翻译： 提供了一种用于管理，跟踪和记录一个或多个生物过程输入，输出及其派生形式的系统和方法。 接收和处理与生物过程投入，产出及其派生形式有关的投入。 投入包括与生物过程和生物过程投入，产出及其派生形式有关的信息。 输入进一步包括与生物过程输入，输出及其派生形式的修改有关的信息。 投入物还包括生物过程的产出。 通过将接收到的输入修改为预定格式来处理输入。 此后，存储所接收的输入和处理的输入。 访问存储的输入用于管理，跟踪和记录生物过程，生物过程输入，输出及其派生形式。

    Grid computing systems and methods thereof
    8.
    发明申请
    Grid computing systems and methods thereof 审中-公开
    网格计算系统及其方法

    公开(公告)号：US20070250365A1

    公开(公告)日：2007-10-25

    申请号：US11407906

    申请日：2006-04-21

    申请人： Anirban Chakrabarti ,  Dheepak Ramanujam ,  Shakeb Ali ,  Ira Gupta ,  Anirban Ghosh

    发明人： Anirban Chakrabarti ,  Dheepak Ramanujam ,  Shakeb Ali ,  Ira Gupta ,  Anirban Ghosh

    IPC分类号： G06F9/46

    CPC分类号： G06F9/5072 ,  G06Q10/06316 ,  G06Q10/0639

    摘要： A grid computing system, method, and computer program product, adapted to execute at least one workflow having a set of predefined operating parameters and including an execution module comprising a plurality of devices having a plurality of heterogeneous resources, wherein the plurality of devices is adapted to execute the at least one job by integrating the plurality of heterogeneous resources. The system further includes at least one grid workflow module. The grid workflow module includes a graphical user interface to provide at least one user to initiate and manage the at least one workflow based on the set of predefined operating parameters and the plurality of heterogeneous resources. Furthermore, the grid workflow module includes a manager module adapted to partition the at least one workflow into multiple jobs prior to the execution of the at least one workflow.

    摘要翻译： 一种网格计算系统，方法和计算机程序产品，其适于执行至少一个具有一组预定义操作参数的工作流，并且包括具有多个异构资源的多个设备的执行模块，其中所述多个设备被适配 以通过集成所述多个异构资源来执行所述至少一个作业。 该系统还包括至少一个网格工作流模块。 网格工作流模块包括图形用户界面，以提供至少一个用户基于一组预定义的操作参数和多个异构资源发起和管理该至少一个工作流。 此外，网格工作流模块包括管理器模块，其适于在至少一个工作流的执行之前将至少一个工作流划分为多个作业。

    System and method for managing information of biological entities
    10.
    发明授权
    System and method for managing information of biological entities 有权
    管理生物实体信息的系统和方法

    公开(公告)号：US08924323B2

    公开(公告)日：2014-12-30

    申请号：US13366810

    申请日：2012-02-06

    申请人： Ajay Shah ,  Srinivas Bolisetty ,  Xian-Wei Meng ,  Ali G. Ozkabak ,  Anirban Ghosh ,  Kirti Jindal ,  Krutin Boloor ,  Ramesh Balakrishnan ,  Manas Ajith Khare ,  Parag Sangoi

    发明人： Ajay Shah ,  Srinivas Bolisetty ,  Xian-Wei Meng ,  Ali G. Ozkabak ,  Anirban Ghosh ,  Kirti Jindal ,  Krutin Boloor ,  Ramesh Balakrishnan ,  Manas Ajith Khare ,  Parag Sangoi

    IPC分类号： G06F17/30 ,  G06F19/12

    CPC分类号： G06F17/30595 ,  G06F19/12

    摘要： A system and method for managing, tracking and recording one or more biological process inputs, outputs and their derived forms is provided. The inputs pertaining to the biological process inputs, outputs and their derived forms are received and processed. The inputs include information related to the biological processes and the biological process inputs, outputs and their derived forms. The inputs further include information related to modifications in the biological process inputs, outputs and their derived forms. The inputs also include outputs of the biological processes. The inputs are processed by modifying the received inputs into a predefined format. Thereafter, the received inputs and processed inputs are stored. The stored inputs are accessed for managing, tracking and recording the biological processes, biological process inputs, outputs and their derived forms.

    摘要翻译： 提供了一种用于管理，跟踪和记录一个或多个生物过程输入，输出及其派生形式的系统和方法。 接收和处理与生物过程投入，产出及其派生形式有关的投入。 投入包括与生物过程和生物过程投入，产出及其派生形式有关的信息。 输入进一步包括与生物过程输入，输出及其派生形式的修改有关的信息。 投入物还包括生物过程的产出。 通过将接收到的输入修改为预定格式来处理输入。 此后，存储所接收的输入和处理的输入。 访问存储的输入用于管理，跟踪和记录生物过程，生物过程输入，输出及其派生形式。