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公开(公告)号:US20220017531A1
公开(公告)日:2022-01-20
申请号:US17374514
申请日:2021-07-13
Applicant: Cepheid
Inventor: Kevin P. Lund , Dmitri Sergueev , Alexander Gall
IPC: C07D491/052 , C09B57/00
Abstract: Automated oligonucleotide synthesis-compatible fluorescent dye phosphoramidite compounds, solid supports, and labeled polynucleotides incorporating the compounds are provided. The compounds allow universal incorporation of the fluorescent label into any position of the polynucleotide.
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公开(公告)号:US11807643B2
公开(公告)日:2023-11-07
申请号:US17374514
申请日:2021-07-13
Applicant: Cepheid
Inventor: Kevin P. Lund , Dmitri Sergueev , Alexander Gall
IPC: C07D491/052 , C09B11/24 , C12Q1/686
CPC classification number: C07D491/052 , C09B11/24 , C12Q1/686
Abstract: Automated oligonucleotide synthesis-compatible fluorescent dye phosphoramidite compounds, solid supports, and labeled polynucleotides incorporating the compounds are provided. The compounds allow universal incorporation of the fluorescent label into any position of the polynucleotide.
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公开(公告)号:US11603555B2
公开(公告)日:2023-03-14
申请号:US15182394
申请日:2016-06-14
Applicant: Cepheid
Inventor: Edwin W. Lai , Andrew Kohlway , Reuel Vanatta , Russell Higuchi , Alexander Gall , Kriszten Kocmond
IPC: C12Q1/6806 , C12Q1/6827 , C12Q1/6886 , C12N15/10 , B01L7/00
Abstract: In various embodiments methods of determining methylation of DNA are provided. In one illustrative, but non-limiting embodiment the method comprises i) contacting a biological sample comprising a nucleic acid to a first matrix material comprising a first column or filter where said matrix material binds and/or filters nucleic acids in said sample and thereby purifies the DNA; ii) eluting the bound DNA from the first matrix material and denaturing the DNA to produce eluted denatured DNA; iii) heating the eluted DNA in the presence of bisulfite ions to produce a deaminated nucleic acid; iv) contacting said deaminated nucleic acid to a second matrix material comprising a second column to bind said deaminated nucleic acid to said second matrix material; v) desulfonating the bound deaminated nucleic acid and/or simultaneously eluting and desulfonating the nucleic acid by contacting the deaminated nucleic acid with an alkaline solution to produce a bisulfite converted nucleic acid; vi) eluting said bisulfite converted nucleic acid from said second matrix material; and vii) performing methylation specific PCR and/or nucleic acid sequencing, and/or high resolution melting analysis (HRM) on said bisulfite-converted nucleic acid to determine the methylation of said nucleic acid, wherein at least steps iv) through vi) are performed in a single reaction cartridge.
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公开(公告)号:US12071547B2
公开(公告)日:2024-08-27
申请号:US17053683
申请日:2019-05-07
Applicant: CEPHEID
Inventor: Kevin P. Lund , Dmitri Sergueev , Maher N. Qabar , Alexander Gall
IPC: C09B11/24 , C12Q1/6876
CPC classification number: C09B11/24 , C12Q1/6876
Abstract: Automated oligonucleotide synthesis-compatible sulforhodamine dye phosphoramidite compounds and labeled polynucleotides incorporating these dyes are provided.
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