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    Mutant sequence analyzer
    1.
    发明申请
    Mutant sequence analyzer 审中-公开
    突变序列分析仪

    公开(公告)号：US20050164198A1

    公开(公告)日：2005-07-28

    申请号：US10513928

    申请日：2003-05-12

    申请人： Kensaku Imai ,  Hisayuki Horai ,  Hirofumi Doi

    发明人： Kensaku Imai ,  Hisayuki Horai ,  Hirofumi Doi

    IPC分类号： C12M1/00 ,  C12Q1/68 ,  G06F17/30 ,  G06F19/22 ,  H04R23/00 ,  G06F19/00 ,  G01N33/48 ,  G01N33/50

    CPC分类号： H04R23/008 ,  G16B30/00

    摘要： All DNA's of a mutant of a sequencing target organic species (e.g., a resistant bacterium, a tumor cell, or a virus) are extracted, and shotgun libraries are generated for the DNA's. DNA fragments are sequentially fetched from these libraries, and each fragment is subjected to sequencing using an automated DNA sequencer. Fragment sequence information such as base sequences of the respective DNA fragments of the mutant output from the sequencer is stored in a fragment sequence database.

    摘要翻译： 提取测序目标有机物种（例如抗性细菌，肿瘤细胞或病毒）的突变体的所有DNA，并为DNA产生猎枪文库。 从这些文库顺序取出DNA片段，并使用自动化DNA测序仪对每个片段进行测序。 片段序列信息，例如从定序器输出的突变体的各个DNA片段的碱基序列存储在片段序列数据库中。

    Document knowledge management apparatus and method
    2.
    发明申请
    Document knowledge management apparatus and method 审中-公开
    文件知识管理手段和方法

    公开(公告)号：US20050154690A1

    公开(公告)日：2005-07-14

    申请号：US10503387

    申请日：2003-02-04

    申请人： Kiyoshi Nitta ,  Hirofumi Doi ,  Yasuhiro Kikuchi ,  Hisayuki Horai

    发明人： Kiyoshi Nitta ,  Hirofumi Doi ,  Yasuhiro Kikuchi ,  Hisayuki Horai

    IPC分类号： G06F17/22 ,  G06F17/30 ,  G06F17/24 ,  G06F17/21 ,  G06F15/00 ,  G06F17/00 ,  G06N5/02 ,  G06F17/27

    CPC分类号： G06F17/2217 ,  G06F16/30

    摘要： In the present invention, a textual document is syntactically analyzed and knowledge is constructed from a single word or plural words. The knowledge is then marked, from the broken down knowledge (represented by the underscores in FIG. 1) or from a part-of-speech, as a related object (node) or a relation (edge) (represented by ‘n’ or ‘e’ shown in FIG. 1). In other words, in the present invention a textual document is treated as knowledge constructed from a single word or plural words. The knowledge extracted from the textual document is structured to form a knowledge structure (such as a graph structure constituted from nodes and edges). At least one link can be established between each of the knowledge structure elements and a semantically closest concept entry in a hierarchical concept dictionary.

    摘要翻译： 在本发明中，文本文档被语法分析，并从单个单词或多个单词构成知识。 然后将知识从分解的知识（由图1中的下划线表示）或从词性部分标记为相关对象（节点）或关系（边缘）（由“n”或 'e'）。 换句话说，在本发明中，文本文档被视为从单个单词或多个单词构成的知识。 从文本文档中提取的知识被构造成形成知识结构（例如由节点和边缘构成的图形结构）。 可以在每个知识结构元素和分层概念词典中的语义上最接近的概念条目之间建立至少一个链接。

    Knowledge search apparatus knowledge search method program and recording medium
    3.
    发明申请
    Knowledge search apparatus knowledge search method program and recording medium 审中-公开
    知识搜索设备知识搜索方法程序和记录介质

    公开(公告)号：US20050146951A1

    公开(公告)日：2005-07-07

    申请号：US10499911

    申请日：2003-01-06

    申请人： Hisayuki Horai ,  Kiyoshi Nitta ,  Hirofumi Doi

    发明人： Hisayuki Horai ,  Kiyoshi Nitta ,  Hirofumi Doi

    IPC分类号： G06F17/30 ,  G06F19/24 ,  G06F19/28 ,  G11C7/00

    CPC分类号： G16B50/00

    摘要： A user designates two targets a relation of which the user is to search as a search start target and a search end target, respectively. The user also designates various search conditions. A binary relation database that stores binary relational information extracted, in advance, from various types of biomolecular databases (e.g., databases that store sequence information on DNAs and the like, structural information on proteins and the like, etc), compound databases (e.g., databases that store characteristics of organic compounds and the like), and literature databases (e.g., databases that store technical literatures, papers, and the like) is accessed, and knowledge between the search start target and the search end target is automatically searched.

    摘要翻译： 用户分别将用户要搜索的关系的两个目标指定为搜索开始目标和搜索结束目标。 用户还指定各种搜索条件。 预先从各种类型的生物分子数据库中提取二进制关系信息的二元关系数据库（例如，存储关于DNA等的序列信息的数据库，关于蛋白质等的结构信息等），化合物数据库（例如， 存储有机化合物的特征的数据库等），以及文献数据库（例如存储技术文献，论文等的数据库），自动搜索搜索开始对象与搜索结束目标之间的知识。

    Rna sequence analyzer, and rna sequence analysis method, program and recording medium
    6.
    发明申请
    Rna sequence analyzer, and rna sequence analysis method, program and recording medium 审中-公开
    Rna序列分析仪，rna序列分析方法，程序和记录介质

    公开(公告)号：US20050112577A1

    公开(公告)日：2005-05-26

    申请号：US10500112

    申请日：2003-01-06

    申请人： Yasuo Uemura ,  Hisayuki Horai

    发明人： Yasuo Uemura ,  Hisayuki Horai

    IPC分类号： C12M1/00 ,  C12Q1/68 ,  G06F17/30 ,  G06F19/00 ,  G06F19/16 ,  G01N33/48 ,  G01N33/50

    CPC分类号： G16B30/00 ,  G16B15/00 ,  G16B50/00

    摘要： A system according to the present invention is constituted so that an RNA sequence analyzer (100) that is an RNA sequence analyzer for analyzing sequence information, and an external system (200) that provides external databases related to the sequence information and the like, external analysis programs for homology searches, and the like are communicably connected to each other through a network (300).

    摘要翻译： 根据本发明的系统被构成为使得作为用于分析序列信息的RNA序列分析器的RNA序列分析器（100）和提供与序列信息等相关的外部数据库的外部系统（200），外部 用于同源性搜索的分析程序等通过网络（300）彼此通信地连接。