COMPOSITIONS AND METHODS FOR IDENTIFYING AND COMPARING MEMBERS OF MICROBIAL COMMUNITIES BY COMPUTATIONAL ANALYSIS OF AMPLICON SEQUENCES
    2.
    发明申请
    COMPOSITIONS AND METHODS FOR IDENTIFYING AND COMPARING MEMBERS OF MICROBIAL COMMUNITIES BY COMPUTATIONAL ANALYSIS OF AMPLICON SEQUENCES 审中-公开
    通过AMPLICON序列的计算分析来鉴定和比较微生物群落成员的组合物和方法

    公开(公告)号:WO2014005094A1

    公开(公告)日:2014-01-03

    申请号:PCT/US2013/048719

    申请日:2013-06-28

    Abstract: In alternative embodiments, the invention provides computational algorithms, computer programs, software and other methods, systems and products of manufacture (e.g., computers, devices or apparatus) for identifying members of microbial communities, their abundance and distribution from amplicon sequence data, and comparing microbial communities and consortia. In alternative embodiments, the invention provides computer- implemented methods comprising a subset of, substantially all, or all of the steps as set forth in the flow chart of Figure 1, Figure 3 or Figure 4. In alternative embodiments, the invention provides methods for identification of consortia, optionally followed by construction of artificial microbial consortia from pure strains or enrichment cultures.

    Abstract translation: 在替代实施例中,本发明提供用于识别微生物群落成员的计算算法,计算机程序,软件和其他方法,系统和产品(例如计算机,设备或设备),其丰度和从扩增子序列数据的分布,以及比较 微生物群落和财团。 在替代实施例中,本发明提供计算机实现的方法,其包括图1,图3或图4的流程图中阐述的步骤的子集,基本上全部或全部。在替代实施例中,本发明提供了用于 识别联合体,随后可以从纯菌株或富集培养物中构建人造微生物菌群。

    MICROBIAL BIOINDICATORS OF HYDROCARBONS IN WATER AND IN MARINE SEDIMENTS AND METHODS FOR MAKING AND USING THEM
    3.
    发明申请
    MICROBIAL BIOINDICATORS OF HYDROCARBONS IN WATER AND IN MARINE SEDIMENTS AND METHODS FOR MAKING AND USING THEM 审中-公开
    烃类在水体和海洋沉积物中的微生物生物调节剂及其制备和使用方法

    公开(公告)号:WO2012016215A2

    公开(公告)日:2012-02-02

    申请号:PCT/US2011046015

    申请日:2011-07-29

    CPC classification number: C12Q1/6888 C07H21/04 C12Q1/689 C12Q2600/16

    Abstract: In alternative embodiments, the invention provides products of manufacture and compositions, e.g., nucleic acid probes, for use as identifying agents or indicators to detect the presence of a hydrocarbon in a sample, e.g., in marine sediments, muds, sands and the like, or in a solution, e.g., an aqueous solution, such as a production water, fresh water, underground water or seawater. In alternative embodiments, the invention provides compositions, e.g., nucleic acid probes or primers or primer pairs, for use as sensors and/or identifying agents to detect the presence of a hydrocarbon in a sample (e.g., in fresh water, underground water or seawater, or a marine mud, sand or sediment), where the presence of the hydrocarbon indicates e.g., the presence of a subsurface oil, petroleum or gas accumulation or deposit. In alternative embodiments, the invention provides compositions and methods for use as tools for offshore oil exploration activities.

    Abstract translation: 在可选的实施方案中,本发明提供了制造产品和组合物,例如核酸探针,用作识别试剂或指示剂以检测样品中烃的存在,例如在海洋沉积物,泥土,沙子等中, 或在溶液中,例如水溶液如生产用水,淡水,地下水或海水中。 在可选的实施方案中,本发明提供组合物,例如核酸探针或引物或引物对,用作传感器和/或鉴定试剂以检测样品中烃的存在(例如在淡水,地下水或海水中 ,或海洋泥,沙或沉积物),其中烃的存在表明例如存在地下油,石油或天然气积聚或沉积物。 在替代实施方案中,本发明提供了用作海上石油勘探活动工具的组合物和方法。

    PLANT GROWTH-PROMOTING MICROBES, COMPOSITIONS, AND USES
    4.
    发明申请
    PLANT GROWTH-PROMOTING MICROBES, COMPOSITIONS, AND USES 审中-公开
    植物生长促进微生物,组合物和用途

    公开(公告)号:WO2016044085A1

    公开(公告)日:2016-03-24

    申请号:PCT/US2015/049636

    申请日:2015-09-11

    CPC classification number: A01N63/00 C12N1/20 C12R1/01 C12R1/41 A01N25/00

    Abstract: The present application relates to plant growth promoting microbes (PGPMs), compositions comprising these PGPMs and methods of using these PGPMs and/or compositions for enhancing plant health, plant growth and/or plant yield, and/or for preventing, inhibiting, or treating the development of plant pathogens or the development of phytopathogenic diseases. This application also provides non-naturally occurring plant varieties that are artificially infected with a PGPM descried herein, as well as seed, reproductive tissue, vegetative tissue, regenerative tissues, plant parts, or progeny thereof.

    Abstract translation: 本申请涉及植物生长促进微生物(PGPM),包含这些PGPM的组合物和使用这些PGPM和/或组合物以增强植物健康,植物生长和/或植物产量和/或用于预防,抑制或治疗 植物病原体的发育或植物病原性疾病的发展。 本申请还提供人工感染本文所述的PGPM以及种子,生殖组织,营养组织,再生组织,植物部分或其后代的非天然存在的植物品种。

    MICROBIAL BIOINDICATORS OF HYDROCARBONS IN WATER AND IN MARINE SEDIMENTS AND METHODS FOR MAKING AND USING THEM

    公开(公告)号:WO2012016215A3

    公开(公告)日:2012-02-02

    申请号:PCT/US2011/046015

    申请日:2011-07-29

    Abstract: In alternative embodiments, the invention provides products of manufacture and compositions, e.g., nucleic acid probes, for use as identifying agents or indicators to detect the presence of a hydrocarbon in a sample, e.g., in marine sediments, muds, sands and the like, or in a solution, e.g., an aqueous solution, such as a production water, fresh water, underground water or seawater. In alternative embodiments, the invention provides compositions, e.g., nucleic acid probes or primers or primer pairs, for use as sensors and/or identifying agents to detect the presence of a hydrocarbon in a sample (e.g., in fresh water, underground water or seawater, or a marine mud, sand or sediment), where the presence of the hydrocarbon indicates e.g., the presence of a subsurface oil, petroleum or gas accumulation or deposit. In alternative embodiments, the invention provides compositions and methods for use as tools for offshore oil exploration activities.

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