TIMING ERROR PROCESSOR THAT USES THE DERIVATIVE OF AN INTERPOLATOR FUNCTION
    1.
    发明申请
    TIMING ERROR PROCESSOR THAT USES THE DERIVATIVE OF AN INTERPOLATOR FUNCTION 有权
    时间误差处理器使用插值函数的衍生物

    公开(公告)号:US20160344540A1

    公开(公告)日:2016-11-24

    申请号:US14720568

    申请日:2015-05-22

    Abstract: A digitized signal is processed via an interpolator. The interpolator performs timing adjustment on the digitized signal. The error signal is determined based on a desired signal and the time-adjusted digitized signal. A corrective phase shift of the digitized signal is determined via a least-mean-squared processing block that uses the error and the derivative of a function used by the interpolator. The corrective phase shift is input to the interpolator to perform the timing adjustment.

    Abstract translation: 通过内插器处理数字化信号。 内插器对数字化信号执行定时调整。 误差信号根据期望的信号和时间调整的数字化信号确定。 数字化信号的校正相移通过使用误差的内插器所使用的函数的导数的最小均方处理块来确定。 校正相移被输入到内插器以执行定时调整。

    TIME-MULTIPLEXED SINGLE INPUT SINGLE OUTPUT (SISO) DATA RECOVERY CHANNEL
    2.
    发明申请
    TIME-MULTIPLEXED SINGLE INPUT SINGLE OUTPUT (SISO) DATA RECOVERY CHANNEL 有权
    时间多路单输入单输出(SISO)数据恢复通道

    公开(公告)号:US20150003221A1

    公开(公告)日:2015-01-01

    申请号:US13931274

    申请日:2013-06-28

    CPC classification number: G11B20/10046 G11B13/045 G11B20/10222

    Abstract: Apparatus and method for recovering data from a multi-channel input signal, such as but not limited to a readback signal from a bit patterned medium (BPM) having a plurality of subtracks. In accordance with some embodiments, a single input single output (SISO) equalizer is adapted to generate equalized outputs responsive to alternating subchannels of the multi-channel input signal. A detector is adapted to generate estimates of data symbols represented by the input signal responsive to the equalized outputs. A switching circuit is adapted to switch in different equalizer coefficients for use by the SISO equalizer for each of the alternating subchannels in the input signal.

    Abstract translation: 用于从多通道输入信号恢复数据的装置和方法,例如但不限于具有多个子轨道的位图形介质(BPM)的回读信号。 根据一些实施例,单输入单输出(SISO)均衡器适于产生响应于多通道输入信号的交替子信道的均衡输出。 检测器适于响应于均衡的输出而产生由输入信号表示的数据符号的估计。 开关电路适于切换不同的均衡器系数,供SISO均衡器用于输入信号中的每个交替子信道。

    Time-multiplexed single input single output (SISO) data recovery channel
    5.
    发明授权
    Time-multiplexed single input single output (SISO) data recovery channel 有权
    时间复用单输入单输出(SISO)数据恢复通道

    公开(公告)号:US09165597B2

    公开(公告)日:2015-10-20

    申请号:US13931274

    申请日:2013-06-28

    CPC classification number: G11B20/10046 G11B13/045 G11B20/10222

    Abstract: Apparatus and method for recovering data from a multi-channel input signal, such as but not limited to a readback signal from a bit patterned medium (BPM) having a plurality of subtracks. In accordance with some embodiments, a single input single output (SISO) equalizer is adapted to generate equalized outputs responsive to alternating subchannels of the multi-channel input signal. A detector is adapted to generate estimates of data symbols represented by the input signal responsive to the equalized outputs. A switching circuit is adapted to switch in different equalizer coefficients for use by the SISO equalizer for each of the alternating subchannels in the input signal.

    Abstract translation: 用于从多通道输入信号恢复数据的装置和方法,例如但不限于具有多个子轨道的位图形介质(BPM)的回读信号。 根据一些实施例,单输入单输出(SISO)均衡器适于产生响应于多通道输入信号的交替子信道的均衡输出。 检测器适于响应于均衡的输出而产生由输入信号表示的数据符号的估计。 开关电路适于切换不同的均衡器系数,供SISO均衡器用于输入信号中的每个交替子信道。

    Event timing detection for DNA sequencing

    公开(公告)号:US11493499B1

    公开(公告)日:2022-11-08

    申请号:US16175223

    申请日:2018-10-30

    Abstract: Systems and methods are disclosed for performing event timing detection for DNA sequencing. In certain embodiments, a method may comprise generating a signal based on a DNA strand passed through a nanopore sensor, sampling the signal to generate a plurality of sample values, and detecting one or more event boundaries based on the sample values, an event representing a movement of a single DNA base of the DNA strand through the nanopore sensor. Detecting the one or more event boundaries may include segmenting the plurality of sample values into multiple events to calculate an optimal total score, assigning an event value to a selected event from the multiple events based on sample values of the selected event, and providing the event value to a base caller to determine a sequence of DNA bases.

    Channel error rate optimization using Markov codes

    公开(公告)号:US10447315B2

    公开(公告)日:2019-10-15

    申请号:US15677304

    申请日:2017-08-15

    Abstract: In one embodiment, a system provides for optimizing an error rate of data through a communication channel. The system includes a data generator operable to generate a training sequence as a Markov code, and to propagate the training sequence through the communication channel. The system also includes a Soft Output Viterbi Algorithm (SOVA) detector operable to estimate data values of the training sequence after propagation through the communication channel. The system also includes an optimizer operable to compare the estimated data values to the generated training sequence, to determine an error rate based on the comparison, and to change the training sequence based on the Markov code to lower the error rate of the data through the communication channel.

    SEGMENTATION AND LABELING FOR SINGLE MOLECULE SEQUENCING

    公开(公告)号:US20230212666A1

    公开(公告)日:2023-07-06

    申请号:US17565696

    申请日:2021-12-30

    CPC classification number: C12Q1/6874 G16B30/10

    Abstract: Systems and methods are disclosed for performing segmentation and labeling of signals generated by single molecule sequencing. In certain embodiments, a method may comprise receiving a training signal generated by molecular detection, segmenting the training signal into a set of events, determining signal characteristics for the set of events, generating a Hidden Markov Model (HMM) based on the set of events and the signal characteristics. The HMM may also be applied to a second signal and may responsively segment the second signal into a second set of events and label the second set of events based on the signal characteristics. A labeled sequence signal output may be provided that includes the second set of events and corresponding labels generated by the HMM.

    CHANNEL ERROR RATE OPTIMIZATION USING MARKOV CODES

    公开(公告)号:US20190058494A1

    公开(公告)日:2019-02-21

    申请号:US15677304

    申请日:2017-08-15

    Abstract: In one embodiment, a system provides for optimizing an error rate of data through a communication channel. The system includes a data generator operable to generate a training sequence as a Markov code, and to propagate the training sequence through the communication channel. The system also includes a Soft Output Viterbi Algorithm (SOVA) detector operable to estimate data values of the training sequence after propagation through the communication channel. The system also includes an optimizer operable to compare the estimated data values to the generated training sequence, to determine an error rate based on the comparison, and to change the training sequence based on the Markov code to lower the error rate of the data through the communication channel.

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