Methods of preparation of gene-specific oligonucleotide libraries and uses thereof
    5.
    发明申请
    Methods of preparation of gene-specific oligonucleotide libraries and uses thereof 审中-公开
    基因特异性寡核苷酸文库的制备方法及其用途

    公开(公告)号:US20060051789A1

    公开(公告)日:2006-03-09

    申请号:US11173100

    申请日:2005-07-01

    IPC分类号: C40B40/08 C12P19/34

    摘要: Methods of preparing gene-specific oligonucleotide libraries are disclosed. In one embodiment a double-stranded RNA corresponding to both sense and antisense strands of mRNA is digested by ribonuclease to produce short RNA fragments. In subsequent ligation steps, flanking oligoribonucleotides of defined sequences may be attached to the 3- and 5-ends of each fragment by RNA ligase (such as T4 RNA ligase). The products of ligation can be reverse transcribed and PCR amplified (RT-PCR) using the oligonucleotides attached to the gene-derived sequences as primer-binding sites. Various methods for incorporating libraries into expression vectors allowing expression of either siRNAs or shRNAs are also disclosed.

    摘要翻译: 公开了制备基因特异性寡核苷酸文库的方法。 在一个实施方案中,对应于mRNA的有义链和反义链的双链RNA被核糖核酸酶消化以产生短RNA片段。 在随后的连接步骤中,确定序列的侧翼寡核糖核苷酸可以通过RNA连接酶(例如T4 RNA连接酶)连接到每个片段的3和5末端。 连接产物可以使用连接到基因衍生序列的寡核苷酸作为引物结合位点进行逆转录和PCR扩增(RT-PCR)。 还公开了将文库掺入允许表达siRNA或shRNA的表达载体的各种方法。