Interaction predicting device
    2.
    发明申请
    Interaction predicting device 审中-公开
    互动预测装置

    公开(公告)号:US20050130224A1

    公开(公告)日:2005-06-16

    申请号:US10516133

    申请日:2003-06-02

    CPC分类号: G16B20/00 G16B15/00 G16B30/00

    摘要: Objective sequence data (10) which is primary sequence information on an objective protein is entered in an interaction site predicting device by the user. A secondary structure prediction simulation is executed on the objective sequence data (10) entered for secondary structure prediction programs (20a to 20d) that predict a secondary structure of a protein from primary sequence information of the protein. Results of secondary structure prediction (30a to 30d) from the respective secondary structure prediction programs (20a to 20d) are compared (60). Based on the comparison result, frustration of a local portion in the primary sequence information of the objective protein is calculated (70). An interaction site of the objective protein is predicted from the calculated frustration of the local portion (80).

    摘要翻译: 作为目标蛋白质的主序列信息的目标序列数据(10)由用户输入到交互站点预测装置。 对从二级结构预测程序(20a到20d)输入的目标序列数据(10)执行二级结构预测模拟,其从蛋白质的一级序列信息预测蛋白质的二级结构。 比较来自各个二级结构预测程序(20a至20d)​​的二级结构预测(30a至30d)的结果(60)。 基于比较结果,计算目标蛋白的一级序列信息中局部部分的挫败(70)。 目标蛋白质的相互作用位点是从计算出的局部部分的挫折中预测的(80)。