-
公开(公告)号:US20100174058A1
公开(公告)日:2010-07-08
申请号:US12683326
申请日:2010-01-06
申请人: Michael W. Reed , Eugeny Alexander Lukhtanov , Alexander A. Gall , Robert O. Dempcy , Nicolaas M.J. Vermeulen
发明人: Michael W. Reed , Eugeny Alexander Lukhtanov , Alexander A. Gall , Robert O. Dempcy , Nicolaas M.J. Vermeulen
CPC分类号: C07H21/00 , C07B2200/11 , C07C245/08 , C07D519/00 , C07F9/2408 , C07F9/572 , C07F9/65522 , C07F9/6561 , C07H21/04 , C09B29/0813 , C09B69/106 , C12Q1/6818 , C40B40/00 , C12Q2565/1025 , C12Q2521/319
摘要: Oligonucleotide probes containing two labels are provided and are useful in hybridization assays. The probes can also contain a minor groove binding group.
摘要翻译: 提供了含有两个标记的寡核苷酸探针,可用于杂交测定。 探针也可以包含一个小沟结合组。
-
公开(公告)号:US07751982B2
公开(公告)日:2010-07-06
申请号:US10672429
申请日:2003-09-26
申请人: Robert O. Dempcy , Alexander A. Gall , Sergey G. Lokhov , Irina A. Afonina , Igor V. Kutyavin , Nicolaas M. J. Vermeulen
发明人: Robert O. Dempcy , Alexander A. Gall , Sergey G. Lokhov , Irina A. Afonina , Igor V. Kutyavin , Nicolaas M. J. Vermeulen
CPC分类号: C07H21/00 , C07B2200/11 , C07H19/06 , C07H19/10 , C07H19/16 , C07H19/20 , C07H19/23 , C12Q1/6832 , C40B40/00 , G06F19/22 , C12Q2525/117
摘要: Methods for designing an oligonucleotide sequence having a selected duplex stability are provided wherein the oligonucleotide portion comprises at least one modified base selected from universal bases, unsubstituted and 3-substituted pyrazolo[3,4-d]pyrimidines and 5-substituted pyrimidines, and optionally having attached minor groove binders and reporter groups.
摘要翻译: 提供了设计具有所选双链体稳定性的寡核苷酸序列的方法,其中寡核苷酸部分包含至少一个选自通用碱基,未取代的和3-取代的吡唑并[3,4-d]嘧啶和5-取代的嘧啶的修饰碱基, 附有小沟结合物和记者组。
-
公开(公告)号:US07662942B2
公开(公告)日:2010-02-16
申请号:US11338866
申请日:2006-01-23
申请人: Michael W. Reed , Eugeny Alexander Lukhtanov , Alexander A. Gall , Robert O. Dempcy , Nicolaas M. J. Vermeulen
发明人: Michael W. Reed , Eugeny Alexander Lukhtanov , Alexander A. Gall , Robert O. Dempcy , Nicolaas M. J. Vermeulen
CPC分类号: C07H21/00 , C07B2200/11 , C07C245/08 , C07D519/00 , C07F9/2408 , C07F9/572 , C07F9/65522 , C07F9/6561 , C07H21/04 , C09B29/0813 , C09B69/106 , C12Q1/6818 , C40B40/00 , C12Q2565/1025 , C12Q2521/319
摘要: Oligonucleotide probes containing two labels are provided and are useful in hybridization assays. The probes can also contain a minor groove binding group.
摘要翻译: 提供了含有两个标记的寡核苷酸探针,可用于杂交测定。 探针也可以包含一个小沟结合组。
-
公开(公告)号:US07368549B2
公开(公告)日:2008-05-06
申请号:US11109923
申请日:2005-04-19
申请人: Robert O. Dempcy , Alexander A Gall , Sergey G. Lokhov , Irina A. Afonina , Michael J. Singer , Igor V. Kutyavin , Nicolaas M. J. Vermeulen
发明人: Robert O. Dempcy , Alexander A Gall , Sergey G. Lokhov , Irina A. Afonina , Michael J. Singer , Igor V. Kutyavin , Nicolaas M. J. Vermeulen
CPC分类号: C07H19/06 , C07B2200/11 , C07H19/10 , C07H19/16 , C07H19/20 , C07H19/23 , C07H21/00 , C12Q1/6832 , C40B40/00 , G06F19/22 , C12Q2525/117
摘要: Modified oligonucleotides are provided containing bases selected from unsubstituted and 3-substituted pyrazolo[3,4-d]pyrimidines and 5-substituted pyrimidines, and optionally have attached minor groove binders and reporter groups.
摘要翻译: 提供了修饰的寡核苷酸,其含有选自未取代的和3-取代的吡唑并[3,4-d]嘧啶和5-取代的嘧啶的碱,并且任选具有连接的小沟结合剂和报道基团。
-
公开(公告)号:US06790945B2
公开(公告)日:2004-09-14
申请号:US09876830
申请日:2001-06-06
IPC分类号: C07H2100
CPC分类号: C07D519/00 , C07B2200/11 , C07C245/08 , C07F9/2408 , C07F9/572 , C07F9/65522 , C07F9/6561 , C07H21/00 , C09B29/0813 , C12Q1/6818 , C40B40/00 , C12Q2565/1025 , C12Q2521/319
摘要: Oligonucleotide probes containing two labels are provided and are useful in hybridization assays. The probes can also contain a minor groove binding group.
摘要翻译: 提供了含有两个标记的寡核苷酸探针,可用于杂交测定。 探针也可以包含一个小沟结合组。
-
公开(公告)号:US06699975B2
公开(公告)日:2004-03-02
申请号:US10093769
申请日:2002-03-07
IPC分类号: C07C24500
CPC分类号: C07D519/00 , C07B2200/11 , C07C245/08 , C07F9/2408 , C07F9/572 , C07F9/65522 , C07F9/6561 , C07H21/00 , C09B29/0813 , C12Q1/6818 , C40B40/00 , C12Q2565/1025 , C12Q2521/319
摘要: Oligonucleotide-fluorophore-quencher conjugates wherein the fluorophore moiety has emission wavelengths in the range of about 300 to about 800 nm, and or where the quencher includes a substituted 4-(phenyldiazenyl)phenylamine structure provide improved signal to noise ratios and other advantageous characteristics in hybridization and related assays. The oligonucleotide-fluorophore-quencher conjugates can be synthesized by utilizing novel phosphoramidite reagents that incorporate the quencher moiety based on the substituted 4-(phenyidiazenyl)phenylamine structure, and or novel phosphoramidite reagents that incorporate a fluorophore moiety based on the substituted coumarin, substituted 7-hydroxy-3H-phenoxazin-3-one, or substituted 5,10-dihydro-10-[phenyl]pyrido[2,3-d;6,5-d′]dipyrimidine-2,4,6,8-(1H,3H,7H,9H,10H)-tetrone structure. Oligonucleotide-fluorophore-quencher-minor groove binder conjugates including a pyrrolo[4,5-e]indolin-7-yl}carbonyl) pyrrolo[4,5-e]indolin-7-yl]carbonyl}pyrrolo[4,5-e]indoline-7-carboxylate (DPI3) moiety as the minor groove binder and the substituted 4-(phenyldiazenyl)phenylamine moiety as the quencher, were synthesized and have substantially improved hybridization and signal to noise ratio properties.
摘要翻译: 寡核苷酸 - 荧光团 - 猝灭剂缀合物,其中荧光团部分具有在约300至约800nm范围内的发射波长,或者其中猝灭剂包括取代的4-(苯基二氮烯基)苯胺结构提供改善的信噪比和其它有利特征 杂交和相关测定。 寡核苷酸 - 荧光团 - 猝灭剂缀合物可以通过利用基于取代的4-(苯基亚基)苯胺结构的掺入猝灭剂部分的新型亚磷酰胺试剂和/或掺入基于取代香豆素的荧光团部分的新型亚磷酰胺试剂来合成,取代7 - 羟基-3H-吩恶嗪-3-酮或取代的5,10-二氢-10- [苯基]吡啶并[2,3-d; 6,5-d']二嘧啶-2,4,6,8-( 1H,3H,7H,9H,10H) - 四酮结构。 吡咯并[4,5-e]二氢吲哚-7-基}羰基)吡咯并[4,5-e]二氢吲哚-7-基]羰基}吡咯并[4,5- e]二氢吲哚-7-羧酸酯(DPI 3)部分作为次槽粘合剂和取代的4-(苯基二氮烯基)苯胺部分作为猝灭剂,并且具有显着改善的杂交和信噪比性质。
-
公开(公告)号:US5574142A
公开(公告)日:1996-11-12
申请号:US991199
申请日:1992-12-15
CPC分类号: A61K47/48092 , A61K47/48246 , A61K47/48415 , A61K47/48715
摘要: A covalently linked conjugate of an oligonucleotide (ODN) with a peptide and a carrier or targeting ligand (ODN-peptide-carrier) includes a therapeutic oligonucleotide which is capable of selectively binding to a target sequence of DNA, RNA or protein inside a target cell. The ODN is covalently linked to a peptide which is capable of being cleaved by proteolytic enzymes inside the target cell. The peptide, in turn is covalently linked to a carrier or targeting ligand moiety which facilitates delivery of the entire ODN-peptide-carrier conjugate into the cell, and preferably into a specific target tissue type. Inside the cell, the peptide is cleaved, releasing the ODN which, by binding to the target DNA, RNA or protein sequence, brings about a beneficial result.
摘要翻译: 寡核苷酸(ODN)与肽和载体或靶向配体(ODN-肽 - 载体)的共价连接的缀合物包括能够选择性地结合目标细胞内的DNA,RNA或蛋白质的靶序列的治疗性寡核苷酸 。 ODN与能够被靶细胞内的蛋白水解酶切割的肽共价连接。 肽又与共价连接到载体或靶向配体部分,其有助于将整个ODN-肽 - 载体缀合物递送到细胞中,优选进入特定的靶组织类型。 在细胞内,肽被切割,释放ODN,其通过结合靶DNA,RNA或蛋白质序列带来有益的结果。
-
公开(公告)号:US08546590B2
公开(公告)日:2013-10-01
申请号:US12858367
申请日:2010-08-17
申请人: Alexander A. Gall
发明人: Alexander A. Gall
IPC分类号: C07D493/10
CPC分类号: C09B56/005 , C09B11/24 , C09B23/0066 , C09B23/083 , C09B29/00 , C09B43/00 , C09B57/00 , C09B57/02 , C09K11/06 , C09K2211/1014 , C09K2211/1022 , C09K2211/1029 , C09K2211/1048 , C09K2211/1088 , Y10T436/143333
摘要: The present invention relates to novel polar fluorescent and quenchers dyes, and minor groove binder with enhanced polarity. The present invention further relates to methods of preparing oligonucleotide probes labeled with polar arsonate dyes under the condition of automated synthesis and method of using such probes.
摘要翻译: 本发明涉及新型极性荧光和猝灭剂染料,以及具有增强极性的小槽粘合剂。 本发明还涉及在自动合成条件下制备用极性温和染料标记的寡核苷酸探针的方法和使用这种探针的方法。
-
公开(公告)号:US5935830A
公开(公告)日:1999-08-10
申请号:US827116
申请日:1997-03-26
IPC分类号: A61K31/70 , A61K38/00 , A61K48/00 , A61P31/00 , A61P35/00 , C07H21/00 , C12N15/10 , C12N15/113 , C12Q1/68 , C12N15/00 , C07H21/04
CPC分类号: C12N15/113 , C07H21/00 , C12N15/102 , C12Q1/6839 , A61K38/00 , C12N2310/153 , C12N2310/311 , C12N2310/335 , C12N2310/3511
摘要: A method for introducing a site-specific mutation into a target polynucleotide sequence is presented. The method involves the use of an oligonucleotide capable of binding to the target sequence, either by triplex formation (mediated by Hoogsteen, reverse Hoogsteen or equivalent base pairing) or by Watson/Crick base pairing (in the presence of a recombinase enzyme). The oligonucleotide of the invention is modified by the covalent attachment of one or more electrophilic groups. When a modified oligonucleotide is bound to its target sequence, the electrophilic group is able to interact with a nearby nucleotide in the target sequence, causing a modification to the nucleotide that results in a change in nucleotide sequence. Compositions used in the practice of the method are also disclosed.
-
公开(公告)号:US07897736B2
公开(公告)日:2011-03-01
申请号:US12683326
申请日:2010-01-06
申请人: Michael W. Reed , Eugeny Alexander Lukhtanov , Alexander A. Gall , Robert O. Dempcy , Nicolaas M. J. Vermeulen
发明人: Michael W. Reed , Eugeny Alexander Lukhtanov , Alexander A. Gall , Robert O. Dempcy , Nicolaas M. J. Vermeulen
CPC分类号: C07H21/00 , C07B2200/11 , C07C245/08 , C07D519/00 , C07F9/2408 , C07F9/572 , C07F9/65522 , C07F9/6561 , C07H21/04 , C09B29/0813 , C09B69/106 , C12Q1/6818 , C40B40/00 , C12Q2565/1025 , C12Q2521/319
摘要: Oligonucleotide probes containing two labels are provided and are useful in hybridization assays. The probes can also contain a minor groove binding group.
摘要翻译: 提供了含有两个标记的寡核苷酸探针,可用于杂交测定。 探针也可以包含一个小沟结合组。
-
-
-
-
-
-
-
-
-