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公开(公告)号:US20160362729A1
公开(公告)日:2016-12-15
申请号:US14498352
申请日:2014-09-26
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6816 , C12Q1/6827 , C12Q1/6869 , G16C99/00 , C12Q2537/143 , C12Q2537/165 , C12Q2531/113 , C12Q2535/122 , C12Q2563/107
摘要: Provided herein are improved methods, compositions, and kits for analysis of nucleic acids. The improved methods, compositions, and kits can enable directional chromosome mapping e.g., using chromosome phasing/haplotyping. The improved methods, compositions, and kits can also enable copy number estimation of a nucleic acid in a sample. Also provided herein are methods, compositions, and kits for determining the linkage of two or more copies of a target nucleic acid in a sample (e.g., whether the two or more copies are on the same chromosome or different chromosomes) or for phasing alleles.
摘要翻译: 本文提供了用于分析核酸的改进的方法,组合物和试剂盒。 改进的方法,组合物和试剂盒可以实现定向染色体定位,例如使用染色体定相/单倍型。 改进的方法,组合物和试剂盒还可以使样品中核酸的拷贝数估计。 本文还提供了用于确定样品中靶核酸的两个或多个拷贝(例如,两个或多个拷贝是位于同一染色体或不同染色体上)或用于定相等位基因的连接的方法,组合物和试剂盒。
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公开(公告)号:US09944998B2
公开(公告)日:2018-04-17
申请号:US14341677
申请日:2014-07-25
IPC分类号: C12N15/10 , C12Q1/70 , C12Q1/68 , G01N33/569
CPC分类号: C12Q1/703 , C12N15/102 , C12Q1/6827 , C12Q1/70 , C12Q1/701 , C12Q2600/156 , G01N33/56983 , G01N2458/10 , Y02A50/54 , Y02A50/58 , Y02A50/60 , C12Q2531/113 , C12Q2537/143 , C12Q2537/165 , C12Q2563/159
摘要: Provided herein are methods, compositions, systems, and kits for recombination assays, many of which involve amplification reactions such as PCR or droplet digital PCR.
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公开(公告)号:US20150197790A1
公开(公告)日:2015-07-16
申请号:US14594950
申请日:2015-01-12
发明人: Svilen Tzonev
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6827 , C12Q1/6816 , C12Q1/686 , C12Q2537/165 , C12Q2545/114 , C12Q2563/173 , C12Q2545/101 , C12Q2563/159
摘要: Methods and compositions are provided for detection and quantification of nucleic acid sequences.
摘要翻译: 提供了用于检测和定量核酸序列的方法和组合物。
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公开(公告)号:US20150038356A1
公开(公告)日:2015-02-05
申请号:US14341677
申请日:2014-07-25
CPC分类号: C12Q1/703 , C12N15/102 , C12Q1/6827 , C12Q1/70 , C12Q1/701 , C12Q2600/156 , G01N33/56983 , G01N2458/10 , Y02A50/54 , Y02A50/58 , Y02A50/60 , C12Q2531/113 , C12Q2537/143 , C12Q2537/165 , C12Q2563/159
摘要: Provided herein are methods, compositions, systems, and kits for recombination assays, many of which involve amplification reactions such as PCR or droplet digital PCR.
摘要翻译: 本文提供用于重组测定的方法,组合物,系统和试剂盒,其中许多涉及扩增反应,例如PCR或液滴数字PCR。
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公开(公告)号:US20140228239A1
公开(公告)日:2014-08-14
申请号:US14173562
申请日:2014-02-05
发明人: Adam M. McCoy , Svilen Tzonev , Frank Hsiung
IPC分类号: G01N33/566
CPC分类号: C12Q1/00 , G01N33/542 , G01N33/581
摘要: The present invention provides methods of detecting a target molecule in a sample comprising incubating the sample with two or more detectably labeled probes, partitioning the sample into multiple partitions, and detecting the presence of the two or more probes in the same partition.
摘要翻译: 本发明提供了检测样品中靶分子的方法,包括用两个或多个可检测标记的探针孵育样品,将样品分成多个分区,以及检测两个或更多个探针在同一分区中的存在。
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公开(公告)号:US09822396B2
公开(公告)日:2017-11-21
申请号:US14622515
申请日:2015-02-13
发明人: Claudia Litterst , Svilen Tzonev , Jeremy Agresti
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6809 , C12Q2521/313 , C12Q2523/101 , C12Q2563/179
摘要: Methods compositions and kits are provided for performing a chromatin or chromosome conformation capture assay in partitions.
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7.
公开(公告)号:US20140162266A1
公开(公告)日:2014-06-12
申请号:US14097923
申请日:2013-12-05
发明人: Niels Klitgord , John Regan , Svilen Tzonev , Eli Hefner , Jennifer R. Berman
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6851 , C12Q2537/16 , C12Q2563/159
摘要: This disclosure provides methods for measuring the copy number for highly amplified and/or abundant genomic loci. Recognized herein is a need for methods for determining nucleic acid copy number, particularly in instances where one locus to be quantified (i.e., the target) is relatively more abundant than a locus of known abundance (i.e., the reference). In some cases, the method involves combining a query nucleic acid sample with a diluting nucleic acid sample and measuring the relative copy number of a target sequence compared with a reference sequence in the combined sample.
摘要翻译: 本公开提供了用于测量高度扩增和/或丰富的基因组基因座的拷贝数的方法。 本文认识到需要用于确定核酸拷贝数的方法,特别是在一个待定量的位点(即目标)相对于已知丰度的基因座(即参考文献)相对更丰富的情况下。 在一些情况下,该方法包括将查询核酸样品与稀释的核酸样品组合,并测量与组合样品中的参考序列相比的靶序列的相对拷贝数。
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公开(公告)号:US09850515B2
公开(公告)日:2017-12-26
申请号:US14173562
申请日:2014-02-05
发明人: Adam M. McCoy , Svilen Tzonev , Frank Hsiung
IPC分类号: G01N33/542 , C12Q1/00 , G01N33/58
CPC分类号: C12Q1/00 , G01N33/542 , G01N33/581
摘要: The present invention provides methods of detecting a target molecule in a sample comprising incubating the sample with two or more detectably labeled probes, partitioning the sample into multiple partitions, and detecting the presence of the two or more probes in the same partition.
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公开(公告)号:US20150225786A1
公开(公告)日:2015-08-13
申请号:US14622515
申请日:2015-02-13
发明人: Claudia Litterst , Svilen Tzonev , Jeremy Agresti
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6809 , C12Q2521/313 , C12Q2523/101 , C12Q2563/179
摘要: Methods compositions and kits are provided for performing a chromatin or chromosome conformation capture assay in partitions.
摘要翻译: 提供方法用于在分区中进行染色质或染色体构象捕获测定的组合物和试剂盒。
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