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公开(公告)号:US20140228254A1
公开(公告)日:2014-08-14
申请号:US14150607
申请日:2014-01-08
IPC分类号: C12N15/10
CPC分类号: C12N15/1068 , C12Q1/6837 , C12Q1/686 , C12Q1/6869 , C12Q1/6874 , C12Q2565/543
摘要: Methods for amplification and sequencing of at least one nucleic acid comprising the following steps: (1) forming at least one nucleic acid template comprising the nucleic acid(s) to be amplified or sequenced, wherein said nucleic acid(s) contains at the 5′ end an oligonucleotide sequence Y and at the 3′ end an oligonucleotide sequence Z and, in addition, the nucleic acid(s) carry at the 5′ end a means for attaching the nucleic acid(s) to a solid support; (2) mixing said nucleic acid template(s) with one or more colony primers X, which can hybridize to the oligonucleotide sequence Z and carries at the 5′ end a means for attaching the colony primers to a solid support, in the presence of a solid support so that the 5′ ends of both the nucleic acid template and the colony primers bind to the solid support; (3) performing one or more nucleic acid amplification reactions on the bound template(s), so that nucleic acid colonies are generated and optionally, performing at least one step of sequence determination of one or more of the nucleic acid colonies generated. Solid supports, kits and apparatus for use in these methods.
摘要翻译: 用于扩增和测序至少一种核酸的方法,包括以下步骤:(1)形成至少一个核酸模板,其包含待扩增或测序的核酸,其中所述核酸在5 '结束寡核苷酸序列Y,在3'端有寡核苷酸序列Z,另外核酸在5'端带有用于将核酸连接到固体支持物上的方法; (2)将所述核酸模板与一个或多个菌落引物X混合,其可与寡核苷酸序列Z杂交,并在5'末端携带用于将菌落引物连接至固体支持物的手段,在存在 固体支持物,使得核酸模板和集落引物的5'末端与固体支持物结合; (3)对结合的模板进行一个或多个核酸扩增反应,从而产生核酸集落,并且任选地,进行生成的一个或多个核酸集落的至少一个序列测定步骤。 用于这些方法的固体支撑物,试剂盒和仪器。
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公开(公告)号:US20080160580A1
公开(公告)日:2008-07-03
申请号:US11506146
申请日:2006-08-17
IPC分类号: C12P19/34
CPC分类号: C12N15/1068 , C12Q1/6837 , C12Q1/686 , C12Q1/6869 , C12Q1/6874 , C12Q2565/543
摘要: Methods for amplification and sequencing of at least one nucleic acid comprising the following steps: (1) forming at least one nucleic acid template comprising the nucleic acid(s) to be amplified or sequenced, wherein said nucleic acid(s) contains at the 5′ end an oligonucleotide sequence Y and at the 3′ end an oligonucleotide sequence Z and, in addition, the nucleic acid(s) carry at the 5′ end a means for attaching the nucleic acid(s) to a solid support; (2) mixing said nucleic acid template(s) with one or more colony primers X, which can hybridize to the oligonucleotide sequence Z and carries at the 5′ end a means for attaching the colony primers to a solid support, in the presence of a solid support so that the 5′ ends of both the nucleic acid template and the colony primers bind to the solid support; (3) performing one or more nucleic acid amplification reactions on the bound template(s), so that nucleic acid colonies are generated and optionally, performing at least one step of sequence determination of one or more of the nucleic acid colonies generated. Solid supports, kits and apparatus for use in these methods.
摘要翻译: 用于扩增和测序至少一种核酸的方法,包括以下步骤:(1)形成至少一个核酸模板,其包含待扩增或测序的核酸,其中所述核酸包含在5 '结束寡核苷酸序列Y,在3'端有寡核苷酸序列Z,另外核酸在5'端带有用于将核酸连接到固体支持物上的方法; (2)将所述核酸模板与一个或多个菌落引物X混合,其可与寡核苷酸序列Z杂交,并在5'末端携带用于将菌落引物连接至固体支持物的手段,在存在 固体支持物,使得核酸模板和集落引物的5'末端与固体支持物结合; (3)对结合的模板进行一个或多个核酸扩增反应,从而产生核酸集落,并且任选地,进行生成的一个或多个核酸集落的至少一个序列测定步骤。 用于这些方法的固体支撑物,试剂盒和仪器。
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公开(公告)号:US08652810B2
公开(公告)日:2014-02-18
申请号:US11506146
申请日:2006-08-17
CPC分类号: C12N15/1068 , C12Q1/6837 , C12Q1/686 , C12Q1/6869 , C12Q1/6874 , C12Q2565/543
摘要: Methods for amplification and sequencing of at least one nucleic acid comprising the following steps: (1) forming at least one nucleic acid template comprising the nucleic acid(s) to be amplified or sequenced, wherein said nucleic acid(s) contains at the 5′ end an oligonucleotide sequence Y and at the 3′ end an oligonucleotide sequence Z and, in addition, the nucleic acid(s) carry at the 5′ end a means for attaching the nucleic acid(s) to a solid support; (2) mixing said nucleic acid template(s) with one or more colony primers X, which can hybridize to the oligonucleotide sequence Z and carries at the 5′ end a means for attaching the colony primers to a solid support, in the presence of a solid support so that the 5′ ends of both the nucleic acid template and the colony primers bind to the solid support; (3) performing one or more nucleic acid amplification reactions on the bound template(s), so that nucleic acid colonies are generated and optionally, performing at least one step of sequence determination of one or more of the nucleic acid colonies generated. Solid supports, kits and apparatus for use in these methods.
摘要翻译: 用于扩增和测序至少一种核酸的方法,包括以下步骤:(1)形成至少一个核酸模板,其包含待扩增或测序的核酸,其中所述核酸在5 '结束寡核苷酸序列Y,在3'端有寡核苷酸序列Z,另外核酸在5'端带有用于将核酸连接到固体支持物上的方法; (2)将所述核酸模板与一个或多个菌落引物X混合,其可与寡核苷酸序列Z杂交,并在5'末端携带用于将菌落引物连接至固体支持物的手段,在存在 固体支持物,使得核酸模板和集落引物的5'末端与固体支持物结合; (3)对结合的模板进行一个或多个核酸扩增反应,从而产生核酸集落,并且任选地,进行生成的一个或多个核酸集落的至少一个序列测定步骤。 用于这些方法的固体支撑物,试剂盒和仪器。
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公开(公告)号:US07115400B1
公开(公告)日:2006-10-03
申请号:US09806531
申请日:1999-09-30
CPC分类号: C12N15/1068 , C12Q1/6837 , C12Q1/686 , C12Q1/6869 , C12Q1/6874 , C12Q2565/543
摘要: Methods for amplification and sequencing of at least one nucleic acid comprising the following steps: (1) forming at least one nucleic acid template comprising the nucleic acid(s) to be amplified or sequenced, wherein said nucleic acid(s) to be amplified or sequenced, wherein said nucleic acid(s) contains at the 5′ end an oligonucleotide sequence Y and at the 3′ end an oligonucleotide sequence Z and, in addition, the nucleic acid(s) carry at the 5′ end a means for attaching the nucleic acid(s) to a solid support; (2) mixing said nucleic acid template(s) with one or more colony primers X, which can hybridize to the oligonucleotide sequence Z and carries at the 5′ end a means for attaching the colony primers to a solid support, in the presence of a solid support so that the 5′ ends of both the nucleic acid template and the colony primers bind to the solid support; (3) performing one or more nucleic acid amplification reactions on the bound template(s), so that nucleic acid colonies are generated and optionally, performing at least one step of sequence determination of one or more of the nucleic acid colonies generated. Solid supports, kits and apparatus for use in these methods.
摘要翻译: 用于扩增和测序至少一种核酸的方法,包括以下步骤:(1)形成至少一个核酸模板,所述核酸模板包含待扩增或测序的核酸,其中所述待扩增的核酸或 其中所述核酸在5'末端含有寡核苷酸序列Y,在3'端含有寡核苷酸序列Z,另外核酸在5'末端携带一个用于附着的装置 所述核酸至固体支持物; (2)将所述核酸模板与一个或多个菌落引物X混合,其可与寡核苷酸序列Z杂交,并在5'末端携带用于将菌落引物连接至固体支持物的手段,在存在 固体支持物,使得核酸模板和集落引物的5'末端与固体支持物结合; (3)对结合的模板进行一个或多个核酸扩增反应,从而产生核酸集落,并且任选地,进行生成的一个或多个核酸集落的至少一个序列测定步骤。 用于这些方法的固体支撑物,试剂盒和仪器。
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公开(公告)号:US09217178B2
公开(公告)日:2015-12-22
申请号:US11792878
申请日:2005-12-13
申请人: Milan Fedurco , Anthony Romieu , Gerardo Turcatti
发明人: Milan Fedurco , Anthony Romieu , Gerardo Turcatti
CPC分类号: C12Q1/6874 , C12Q1/6869 , C12Q2563/107 , C12Q2527/125 , C12Q2523/107
摘要: The invention relates to an additive which can be added to buffers used in nucleotide detection processes and improved methods of nucleic acid sequencing using the additive. In particular the invention relates to use of the additive to improve the efficiency of fluorescence-based multiple cycle nucleic acid sequencing reactions.
摘要翻译: 本发明涉及可添加到用于核苷酸检测过程的缓冲液中的添加剂和使用该添加剂的改进的核酸测序方法。 特别地,本发明涉及添加剂用于提高基于荧光的多循环核酸测序反应的效率的用途。
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公开(公告)号:US20080280773A1
公开(公告)日:2008-11-13
申请号:US11792878
申请日:2005-12-13
申请人: Milan Fedurco , Anthony Romieu , Gerardo Turcatti
发明人: Milan Fedurco , Anthony Romieu , Gerardo Turcatti
CPC分类号: C12Q1/6874 , C12Q1/6869 , C12Q2563/107 , C12Q2527/125 , C12Q2523/107
摘要: The invention relates to an additive which can be added to buffers used in nucleotide detection processes and improved methods of nucleic acid sequencing using this additive. In particular the invention relates to use of the additive to improve the efficiency of fluorescence-based multiple cycle nucleic acid sequencing reactions.
摘要翻译: 本发明涉及一种添加剂,其可加入用于核苷酸检测过程的缓冲液和使用该添加剂的改进的核酸测序方法。 特别地,本发明涉及添加剂用于提高基于荧光的多循环核酸测序反应的效率的用途。
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公开(公告)号:US20140349891A1
公开(公告)日:2014-11-27
申请号:US14166670
申请日:2014-01-28
申请人: Xiaohai Liu , John Milton , Geoffrey Paul Smith , Colin Lloyd Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
发明人: Xiaohai Liu , John Milton , Geoffrey Paul Smith , Colin Lloyd Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
IPC分类号: C12Q1/68
CPC分类号: B01J19/0046 , B01J2219/00596 , B01J2219/00608 , B01J2219/00675 , B01J2219/00722 , C12Q1/6806 , C12Q1/6834 , C12Q1/6874 , C12Q2565/543 , C12Q2535/101 , C12Q2523/113 , C12Q2523/107 , C12Q2521/331 , C12Q2521/307
摘要: The invention relates to methods of generating templates for a nucleic acid sequencing reaction which comprise: providing at least one double-stranded nucleic acid molecule, wherein both strands of the double-stranded nucleic acid molecule are attached to a solid support at the 5′ end, cleaving one or both strands of the double-stranded nucleic acid molecule, and subjecting the cleaved strand(s) to denaturing conditions to remove the portion of the cleaved strand(s) not attached to the solid support, thereby generating a partially or substantially single-stranded template for a nucleic acid sequencing reaction,
摘要翻译: 本发明涉及产生用于核酸测序反应的模板的方法,其包括:提供至少一个双链核酸分子,其中双链核酸分子的两条链在5'末端连接到固体支持物上 切割双链核酸分子的一条或两条链,并使切割的链进行变性条件以除去未连接到固体支持物上的部分切割的链,从而产生部分或基本上 用于核酸测序反应的单链模板,
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公开(公告)号:US09085802B2
公开(公告)日:2015-07-21
申请号:US14166670
申请日:2014-01-28
申请人: Xiaohai Liu , John Milton , Geoffrey Paul Smith , Colin Lloyd Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
发明人: Xiaohai Liu , John Milton , Geoffrey Paul Smith , Colin Lloyd Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
IPC分类号: C12Q1/68
CPC分类号: B01J19/0046 , B01J2219/00596 , B01J2219/00608 , B01J2219/00675 , B01J2219/00722 , C12Q1/6806 , C12Q1/6834 , C12Q1/6874 , C12Q2565/543 , C12Q2535/101 , C12Q2523/113 , C12Q2523/107 , C12Q2521/331 , C12Q2521/307
摘要: The invention relates to methods of generating templates for a nucleic acid sequencing reaction which comprise: providing at least one double-stranded nucleic acid molecule, wherein both strands of the double-stranded nucleic acid molecule are attached to a solid support at the 5′ end, cleaving one or both strands of the double-stranded nucleic acid molecule, and subjecting the cleaved strand(s) to denaturing conditions to remove the portion of the cleaved strand(s) not attached to the solid support, thereby generating a partially or substantially single-stranded template for a nucleic acid sequencing reaction.
摘要翻译: 本发明涉及产生用于核酸测序反应的模板的方法,其包括:提供至少一个双链核酸分子,其中双链核酸分子的两条链在5'末端连接到固体支持物 切割双链核酸分子的一条或两条链,并使切割的链进行变性条件以除去未连接到固体支持物上的部分切割的链,从而产生部分或基本上 用于核酸测序反应的单链模板。
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公开(公告)号:US08715966B2
公开(公告)日:2014-05-06
申请号:US13450920
申请日:2012-04-19
申请人: Liu Xiaohai , John Milton , Geoffrey Paul Smith , Colin Lloyd Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
发明人: Liu Xiaohai , John Milton , Geoffrey Paul Smith , Colin Lloyd Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
CPC分类号: B01J19/0046 , B01J2219/00596 , B01J2219/00608 , B01J2219/00675 , B01J2219/00722 , C12Q1/6806 , C12Q1/6834 , C12Q1/6874 , C12Q2565/543 , C12Q2535/101 , C12Q2523/113 , C12Q2523/107 , C12Q2521/331 , C12Q2521/307
摘要: The invention relates to methods of generating templates for a nucleic acid sequencing reaction which comprise: providing at least one double-stranded nucleic acid molecule, wherein both strands of the double-stranded nucleic acid molecule are attached to a solid support at the 5′ end, cleaving one or both strands of the double-stranded nucleic acid molecule, and subjecting the cleaved strand(s) to denaturing conditions to remove the portion of the cleaved strand(s) not attached to the solid support, thereby generating a partially or substantially single-stranded template for a nucleic acid sequencing reaction.
摘要翻译: 本发明涉及产生用于核酸测序反应的模板的方法,其包括:提供至少一个双链核酸分子,其中双链核酸分子的两条链在5'末端连接到固体支持物上 切割双链核酸分子的一条或两条链,并使切割的链进行变性条件以除去未连接到固体支持物上的部分切割的链,从而产生部分或基本上 用于核酸测序反应的单链模板。
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公开(公告)号:US20120208194A1
公开(公告)日:2012-08-16
申请号:US13450920
申请日:2012-04-19
申请人: Xiaohai Liu , John Milton , Geoffrey Paul Smith , Colin Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
发明人: Xiaohai Liu , John Milton , Geoffrey Paul Smith , Colin Barnes , Isabelle Marie Julia Rasolonjatovo , Roberto Rigatti , Xiaolin Wu , Tobias William Barr Ost , Graham John Worsley , David James Earnshaw , Gerardo Turcatti , Anthony Romieu
CPC分类号: B01J19/0046 , B01J2219/00596 , B01J2219/00608 , B01J2219/00675 , B01J2219/00722 , C12Q1/6806 , C12Q1/6834 , C12Q1/6874 , C12Q2565/543 , C12Q2535/101 , C12Q2523/113 , C12Q2523/107 , C12Q2521/331 , C12Q2521/307
摘要: The invention relates to methods of generating templates for a nucleic acid sequencing reaction which comprise: providing at least one double-stranded nucleic acid molecule, wherein both strands of the double-stranded nucleic acid molecule are attached to a solid support at the 5′ end, cleaving one or both strands of the double-stranded nucleic acid molecule, and subjecting the cleaved strand(s) to denaturing conditions to remove the portion of the cleaved strand(s) not attached to the solid support, thereby generating a partially or substantially single-stranded template for a nucleic acid sequencing reaction,
摘要翻译: 本发明涉及产生用于核酸测序反应的模板的方法,其包括:提供至少一个双链核酸分子,其中双链核酸分子的两条链在5'末端连接到固体支持物上 切割双链核酸分子的一条或两条链,并使切割的链进行变性条件以除去未连接到固体支持物上的部分切割的链,从而产生部分或基本上 用于核酸测序反应的单链模板,
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