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公开(公告)号:US10597642B2
公开(公告)日:2020-03-24
申请号:US15690945
申请日:2017-08-30
Applicant: Life Technologies Corporation
Inventor: Peter Vander Horn , Cheng-Yao Chen , Guobin Luo , Michael Previte , Jamshid Temirov , Theo Nikiforov , Zhaohui Zhou , Hongye Sun , Yufang Wang , Stefanie Yukiko Nishimura , Hongyi Wang , Marian Peris , Barnett Rosenblum , Michael Phelan
IPC: C12Q1/68 , C12N9/12 , C12Q1/6827 , C12Q1/6869 , C12Q1/6872 , C12Q1/6804 , C12Q1/6818
Abstract: Provided herein are compositions and systems for use in polymerase-dependent, nucleotide transient-binding methods. The methods are useful for deducing the sequence of a template nucleic acid molecule and single nucleotide polymorphism (SNP) analyses. The methods rely on the fact that the polymerase transient-binding time for a complementary nucleotide is longer compared to that of a non-complementary nucleotide. The labeled nucleotides transiently-binds the polymerase in a template-dependent manner, but does not incorporate. The methods are conducted under any reaction condition that permits transient binding of a complementary or non-complementary nucleotide to a polymerase, and inhibits nucleotide incorporation.
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公开(公告)号:US09976128B2
公开(公告)日:2018-05-22
申请号:US14754203
申请日:2015-06-29
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Peter Vander Horn , Theo Nikiforov , Guobin Luo , Mindy Landes , Daniel Mazur , Eileen Tozer , Tommie Lincecum
CPC classification number: C12N9/1252 , C12Q1/6846 , C12Q1/686 , C12Y207/07007
Abstract: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragment thereof are provided that allow for nucleic acid amplification. In one aspect, the disclosure relates to modified polymerases useful for nucleic acid sequencing, genotyping, copy number variation analysis, paired-end sequencing and other forms of genetic analysis. In some aspects, the disclosure relates to modified polymerases useful for the generation of nucleic acid libraries or nucleic acid templates for use in various downstream processes. In some aspects, the disclosure relates to the identification of homologous amino acid mutations that can be transferred across classes or families of polymerases to provide novel polymerases with altered catalytic properties. In some aspects, the disclosure provides modified polymerases having enhanced catalytic properties as compared to a reference polymerase.
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公开(公告)号:US09765310B2
公开(公告)日:2017-09-19
申请号:US14991230
申请日:2016-01-08
Applicant: Life Technologies Corporation
Inventor: Peter Vander Horn , Cheng-Yao Chen , Guobin Luo , Michael Previte , Jamshid Temirov , Theo Nikiforov , Zhaohui Zhou , Hongye Sun , Yufang Wang , Stefanie Yukiko Nishimura , Hongyi Wang , Marian Peris , Barnett Rosenblum , Michael Phelan
CPC classification number: C12N9/1252 , C12Q1/68 , C12Q1/6804 , C12Q1/6818 , C12Q1/6827 , C12Q1/6869 , C12Q1/6872 , C12Y207/07007 , G01N2500/00 , C12Q2565/632 , C12Q2563/137 , C12Q2563/107 , C12Q2565/30 , C12Q2537/157
Abstract: Provided herein are compositions and systems for use in polymerase-dependent, nucleotide transient-binding methods. The methods are useful for deducing the sequence of a template nucleic acid molecule and single nucleotide polymorphism (SNP) analyses. The methods rely on the fact that the polymerase transient-binding time for a complementary nucleotide is longer compared to that of a non-complementary nucleotide. The labeled nucleotides transiently-binds the polymerase in a template-dependent manner, but does not incorporate. The methods are conducted under any reaction condition that permits transient binding of a complementary or non-complementary nucleotide to a polymerase, and inhibits nucleotide incorporation.
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公开(公告)号:US09657281B2
公开(公告)日:2017-05-23
申请号:US14502201
申请日:2014-09-30
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Peter Vander Horn , Daniel Mazur , Theo Nikiforov , Mindy Landes , Eileen Tozer
CPC classification number: C12N9/1252 , C12Q1/686 , C12Q1/6869
Abstract: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragments thereof are provided that allow for nucleic acid amplification. In some aspects, the disclosure provides modified polymerases having lower systematic error as compared to a reference polymerase. In one aspect, the disclosure relates to modified polymerases useful for nucleic acid sequencing, genotyping, copy number variation analysis, paired-end sequencing and other forms of genetic analysis. In some aspects, the disclosure relates to modified polymerases useful for the generation of nucleic acid libraries or nucleic acid templates. In some aspects, the disclosure relates to the identification of homologous amino acid mutations that can be transferred across classes or families of polymerases to provide novel polymerases with altered properties.
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公开(公告)号:US12215383B2
公开(公告)日:2025-02-04
申请号:US17725369
申请日:2022-04-20
Applicant: Life Technologies Corporation
Inventor: Daniel Mazur , Eileen Tozer , Sihong Chen , Peter Vander Horn , Tommie Lincecum
IPC: C12N9/12 , C12Q1/686 , C12Q1/6869
Abstract: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragments thereof, such as modified Taq polymerases, are provided that allow for improved nucleic acid amplification. In some aspects, the disclosure provides modified polymerases having improved thermostability, accuracy, processivity and/or read length as compared to a referenceTaq polymerase. In some aspects, the disclosure relates to modified polymerases or biologically active fragments thereof, useful for amplification methods, and in practically illustrative embodiments, emulsion PCR.
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公开(公告)号:US20180305673A1
公开(公告)日:2018-10-25
申请号:US15959839
申请日:2018-04-23
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Peter Vander Horn , Theo Nikiforov , Guobin Luo , Mindy Landes , Daniel Mazur , Eileen Tozer , Tommie Lloyd Lincecum
IPC: C12N9/12 , C12Q1/686 , C12Q1/6844
CPC classification number: C12N9/1252 , C12Q1/6846 , C12Q1/686 , C12Y207/07007
Abstract: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragment thereof are provided that allow for nucleic acid amplification. In one aspect, the disclosure relates to modified polymerases useful for nucleic acid sequencing, genotyping, copy number variation analysis, paired-end sequencing and other forms of genetic analysis. In some aspects, the disclosure relates to modified polymerases useful for the generation of nucleic acid libraries or nucleic acid templates for use in various downstream processes. In some aspects, the disclosure relates to the identification of homologous amino acid mutations that can be transferred across classes or families of polymerases to provide novel polymerases with altered catalytic properties. In some aspects, the disclosure provides modified polymerases having enhanced catalytic properties as compared to a reference polymerase.
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公开(公告)号:US20160208318A1
公开(公告)日:2016-07-21
申请号:US14991230
申请日:2016-01-08
Applicant: Life Technologies Corporation
Inventor: Peter Vander Horn , Cheng-Yao Chen , Guobin Luo , Michael Previte , Jamshid Temirov , Theo Nikiforov , Zhaohui Zhou , Hongye Sun , Yufang Wang , Stefanie Yukiko Nishimura , Hongyi Wang , Marian Peris , Barnett Rosenblum , Michael Phelan
IPC: C12Q1/68
CPC classification number: C12N9/1252 , C12Q1/68 , C12Q1/6804 , C12Q1/6818 , C12Q1/6827 , C12Q1/6869 , C12Q1/6872 , C12Y207/07007 , G01N2500/00 , C12Q2565/632 , C12Q2563/137 , C12Q2563/107 , C12Q2565/30 , C12Q2537/157
Abstract: Provided herein are compositions and systems for use in polymerase-dependent, nucleotide transient-binding methods. The methods are useful for deducing the sequence of a template nucleic acid molecule and single nucleotide polymorphism (SNP) analyses. The methods rely on the fact that the polymerase transient-binding time for a complementary nucleotide is longer compared to that of a non-complementary nucleotide. The labeled nucleotides transiently-binds the polymerase in a template-dependent manner, but does not incorporate. The methods are conducted under any reaction condition that permits transient binding of a complementary or non-complementary nucleotide to a polymerase, and inhibits nucleotide incorporation.
Abstract translation: 本文提供了用于聚合酶依赖性核苷酸瞬变结合方法的组合物和系统。 该方法可用于推导模板核酸分子和单核苷酸多态性(SNP)分析的序列。 该方法依赖于与非互补核苷酸相比,互补核苷酸的聚合酶瞬时结合时间更长的事实。 标记的核苷酸以模板依赖的方式瞬时结合聚合酶,但不包括在内。 所述方法在允许互补或非互补核苷酸与聚合酶短暂结合并且抑制核苷酸掺入的任何反应条件下进行。
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公开(公告)号:US20150368626A1
公开(公告)日:2015-12-24
申请号:US14754203
申请日:2015-06-29
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Peter Vander Horn , Theo Nikiforov , Guobin Luo , Mindy Landes , Daniel Mazur , Eileen Tozer , Tommie Lincecum
CPC classification number: C12N9/1252 , C12Q1/6846 , C12Q1/686 , C12Y207/07007
Abstract: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragment thereof are provided that allow for nucleic acid amplification. In one aspect, the disclosure relates to modified polymerases useful for nucleic acid sequencing, genotyping, copy number variation analysis, paired-end sequencing and other forms of genetic analysis. In some aspects, the disclosure relates to modified polymerases useful for the generation of nucleic acid libraries or nucleic acid templates for use in various downstream processes. In some aspects, the disclosure relates to the identification of homologous amino acid mutations that can be transferred across classes or families of polymerases to provide novel polymerases with altered catalytic properties. In some aspects, the disclosure provides modified polymerases having enhanced catalytic properties as compared to a reference polymerase.
Abstract translation: 本公开提供了可用于核酸聚合的组合物,方法,试剂盒,系统和装置。 特别地,提供了允许核酸扩增的修饰的聚合酶及其生物活性片段。 一方面,本公开涉及可用于核酸测序,基因分型,拷贝数变异分析,配对末端测序和其他形式遗传分析的修饰聚合酶。 在一些方面,本公开涉及可用于产生用于各种下游过程的核酸文库或核酸模板的修饰聚合酶。 在一些方面,本公开涉及可以跨聚合酶类或家族转移的同源氨基酸突变的鉴定,以提供具有改变的催化性质的新型聚合酶。 在一些方面,本公开提供与参考聚合酶相比具有增强的催化性质的修饰聚合酶。
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公开(公告)号:US11821011B2
公开(公告)日:2023-11-21
申请号:US17445047
申请日:2021-08-13
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Peter Vander Horn , Daniel Mazur , Theo Nikiforov , Mindy Landes , Eileen Tozer
IPC: C12N9/12 , C12Q1/68 , C12Q1/686 , C12Q1/6869
CPC classification number: C12N9/1252 , C12Q1/686 , C12Q1/6869
Abstract: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragments thereof are provided that allow for nucleic acid amplification. In some aspects, the disclosure provides modified polymerases having lower systematic error as compared to a reference polymerase. In one aspect, the disclosure relates to modified polymerases useful for nucleic acid sequencing, genotyping, copy number variation analysis, paired-end sequencing and other forms of genetic analysis. In some aspects, the disclosure relates to modified polymerases useful for the generation of nucleic acid libraries or nucleic acid templates. In some aspects, the disclosure relates to the identification of homologous amino acid mutations that can be transferred across classes or families of polymerases to provide novel polymerases with altered properties.
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公开(公告)号:US20220307071A1
公开(公告)日:2022-09-29
申请号:US17725369
申请日:2022-04-20
Applicant: Life Technologies Corporation
Inventor: Daniel Mazur , Eileen Tozer , Sihong Chen , Peter Vander Horn , Tommie Lincecum
IPC: C12Q1/686 , C12Q1/6869 , C12N9/12
Abstract: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragments thereof, such as modified Taq polymerases, are provided that allow for improved nucleic acid amplification. In some aspects, the disclosure provides modified polymerases having improved thermostability, accuracy, processivity and/or read length as compared to a referenceTaq polymerase. In some aspects, the disclosure relates to modified polymerases or biologically active fragments thereof, useful for amplification methods, and in practically illustrative embodiments, emulsion PCR.
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