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公开(公告)号:US10329544B2
公开(公告)日:2019-06-25
申请号:US15091717
申请日:2016-04-06
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Chieh-Yuan Li , David Ruff , Shiaw-Min Chen , Jennifer O'Neil , Rachel Kasinskas , Jonathan Rothberg , Bin Li , Kai Qin Lao , Wolfgang Hinz
IPC: C12Q1/68 , C12N9/12 , C12Q1/6853 , C12Q1/6844 , C12Q1/6855 , C12Q1/686 , C12Q1/6874
Abstract: In some embodiments, the present teachings provide methods for nucleic acid amplification, comprising forming a reaction mixture, and subjecting the reaction mixture to conditions suitable for nucleic acid amplification. In some embodiments, methods for nucleic acid amplification include subjecting the nucleic acid to be amplified to partially denaturing conditions. In some embodiments, methods for nucleic acid amplification include amplifying without fully denaturing the nucleic acid that is amplified. In some embodiments, the methods for nucleic acid amplification employ an enzyme that catalyzes homologous recombination and a polymerase. In some embodiments, methods for nucleic acid amplification can be conducted in a single reaction vessel. In some embodiments, methods for nucleic acid amplification can be conducted in a single continuous liquid phase of a reaction mixture, without need for compartmentalization of the reaction mixture or immobilization of reaction components. In some embodiments, methods for nucleic acid amplification comprise a amplifying at least one polynucleotide onto a surface under isothermal amplification conditions, optionally in the presence of a polymer. The polymer can include a sieving agent and/or a diffusion-reducing agent.
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公开(公告)号:US10113195B2
公开(公告)日:2018-10-30
申请号:US14789922
申请日:2015-07-01
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Chieh-Yuan Li , David Ruff , Jennifer O'Neil , Rachel Kasinskas , Shiaw-Min Chen , Jonathan Rothberg , Bin Li , Kai Qin Lao
IPC: C12Q1/68 , C12Q1/6844 , C12Q1/6874
Abstract: In some embodiments, the present teachings provide methods for nucleic acid amplification, comprising forming a reaction mixture, and subjecting the reaction mixture to conditions suitable for nucleic acid amplification. In some embodiments, methods for nucleic acid amplification include subjecting the nucleic acid to be amplified to partially denaturing conditions. In some embodiments, methods for nucleic acid amplification include amplifying without fully denaturing the nucleic acid that is amplified. In some embodiments, the methods for nucleic acid amplification employ an enzyme that catalyzes homologous recombination and a polymerase. In some embodiments, methods for nucleic acid amplification can be conducted in a single reaction vessel. In some embodiments, methods for nucleic acid amplification can be conducted in a single continuous liquid phase of a reaction mixture, without need for compartmentalization of the reaction mixture or immobilization of reaction components. In some embodiments, methods for nucleic acid amplification comprise a amplifying at least one polynucleotide onto a surface under isothermal amplification conditions, optionally in the presence of a polymer. The polymer can include a sieving agent and/or a diffusion-reducing agent.
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公开(公告)号:US11072824B2
公开(公告)日:2021-07-27
申请号:US16656839
申请日:2019-10-18
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Shiaw-Min Chen , Elana Swartzman , David Ruff , Mark Shannon , Julia Lu , Stephen Hendricks
IPC: C12Q1/68 , C12Q1/6855 , C12Q1/6804
Abstract: This application relates to methods for ligating oligonucleotides having complementarity to a target nucleic acid, and amplifying the ligated oligonucleotides, where ligation and amplification occur in the same reaction mixture.
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公开(公告)号:US10472671B2
公开(公告)日:2019-11-12
申请号:US14955386
申请日:2015-12-01
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Shiaw-Min Chen , Elana Swartzman , David Ruff , Mark Shannon , Julia Lu , Stephen Hendricks
IPC: C12Q1/68 , C12Q1/6855 , C12Q1/6804
Abstract: This application relates to methods for ligating oligonucleotides having complementarity to a target nucleic acid, and amplifying the ligated oligonucleotides, where ligation and amplification occur in the same reaction mixture.
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公开(公告)号:US09334531B2
公开(公告)日:2016-05-10
申请号:US14023361
申请日:2013-09-10
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Chieh-Yuan Li , David Ruff , Shiaw-Min Chen , Jennifer O'Neil , Rachel Kasinskas , Jonathan Rothberg , Bin Li , Kai Qin Lao
IPC: C12Q1/68
CPC classification number: C12N9/1252 , C12Q1/6846 , C12Q1/6853 , C12Q1/6855 , C12Q1/686 , C12Q1/6874 , C12Y207/07007 , C12Q2531/119 , C12Q2565/537
Abstract: In some embodiments, the present teachings provide methods for nucleic acid amplification, comprising forming a reaction mixture, and subjecting the reaction mixture to conditions suitable for nucleic acid amplification. In some embodiments, methods for nucleic acid amplification include subjecting the nucleic acid to be amplified to partially denaturing conditions. In some embodiments, methods for nucleic acid amplification include amplifying without fully denaturing the nucleic acid that is amplified. In some embodiments, the methods for nucleic acid amplification employ an enzyme that catalyzes homologous recombination and a polymerase. In some embodiments, methods for nucleic acid amplification can be conducted in a single reaction vessel. In some embodiments, methods for nucleic acid amplification can be conducted in a single continuous liquid phase of a reaction mixture, without need for compartmentalization of the reaction mixture or immobilization of reaction components. In some embodiments, methods for nucleic acid amplification comprise a amplifying at least one polynucleotide onto a surface under isothermal amplification conditions, optionally in the presence of a polymer. The polymer can include a sieving agent and/or a diffusion-reducing agent.
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公开(公告)号:US11725195B2
公开(公告)日:2023-08-15
申请号:US17302192
申请日:2021-04-27
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Chieh-Yuan Li , David Ruff , Shiaw-Min Chen , Jennifer O'Neil , Rachel Kasinskas , Jonathan Rothberg , Bin Li , Kai Qin Lao
IPC: C12Q1/68 , C12N9/12 , C12Q1/6853 , C12Q1/6844 , C12Q1/6855 , C12Q1/686 , C12Q1/6874
CPC classification number: C12N9/1252 , C12Q1/686 , C12Q1/6846 , C12Q1/6853 , C12Q1/6855 , C12Q1/6874 , C12Y207/07007 , C12Q1/6846 , C12Q2531/119 , C12Q2565/537 , C12Q1/6855 , C12Q2531/119 , C12Q2565/537
Abstract: The present disclosure provides methods, compositions, kits and systems for nucleic acid amplification. In some embodiments, nucleic acid amplification methods include subjecting the nucleic acid to be amplified to partially denaturing conditions. In some embodiments, nucleic acid amplification methods include amplifying without fully denaturing the nucleic acid that is amplified. In some embodiments, the nucleic acid amplification method employs an enzyme that catalyzes homologous recombination and a polymerase. In some embodiments, methods for nucleic acid amplification can be conducted in a single reaction vessel and/or in a single continuous liquid phase of a reaction mixture, without need for compartmentalization of the reaction mixture or immobilization of reaction components. In some embodiments, methods for nucleic acid amplification comprise amplifying at least one polynucleotide onto a surface under isothermal amplification conditions, optionally in the presence of a polymer which can include a sieving agent and/or a diffusion-reducing agent.
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公开(公告)号:US10913944B2
公开(公告)日:2021-02-09
申请号:US15542795
申请日:2016-01-11
Applicant: Life Technologies Corporation
Inventor: Stephan Berosik , Jianbo Gao , Shiaw-Min Chen , H. Michael Wenz
IPC: C12Q1/6806 , C12N15/10
Abstract: Methods, systems, kits and compositions are described for quality control and quantitation of nucleic acid libraries of double stranded nucleic acid libraries prior to massively parallel sequencing. Electrophoretic separation within a channel using a detectably labeled single stranded sizing ladder may be used to define the molecular weight range and amount of the double stranded nucleic acids.
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公开(公告)号:US11447815B2
公开(公告)日:2022-09-20
申请号:US16228304
申请日:2018-12-20
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Shiaw-Min Chen , David W. Ruff , Harrison Leong
IPC: C12Q1/6844 , G16B25/00 , G16B40/00 , G16B25/20 , G16B40/10
Abstract: Various embodiments of methods for analyzing proximity binding assay (PBA) data are disclosed. Proximity binding assays as a class of analyses offer the advantages of the sensitivity and specificity of biorecognition binding, along with the exponential signal amplification offered by a variety of oligonucleotide amplification reactions, such as the polymerase chain reaction (PCR). However, as various proximity binding assays have reaction kinetics governed by an additional step of the binding of a biorecognition probe (BRP) with a target molecule, there is a need for methods for the analysis of PBA data that are particularly suited to the unique characteristics of such data.
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公开(公告)号:US20210180048A1
公开(公告)日:2021-06-17
申请号:US17141682
申请日:2021-01-05
Applicant: Life Technologies Corporation
Inventor: Stephan Berosik , Jianbo Gao , Shiaw-Min Chen , H. Michael Wenz
IPC: C12N15/10 , C12Q1/6806
Abstract: Methods, systems, kits and compositions are described for quality control and quantitation of nucleic acid libraries of double stranded nucleic acid libraries prior to massively parallel sequencing. Electrophoretic separation within a channel using a detectably labeled single stranded sizing ladder may be used to define the molecular weight range and amount of the double stranded nucleic acids.
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公开(公告)号:US11001815B2
公开(公告)日:2021-05-11
申请号:US16442341
申请日:2019-06-14
Applicant: LIFE TECHNOLOGIES CORPORATION
Inventor: Chieh-Yuan Li , David Ruff , Shiaw-Min Chen , Jennifer O'Neil , Rachel Kasinskas , Jonathan Rothberg , Bin Li , Kai Qin Lao
IPC: C12Q1/68 , C12N9/12 , C12Q1/6853 , C12Q1/6844 , C12Q1/6855 , C12Q1/686 , C12Q1/6874
Abstract: The present disclosure provides methods, compositions, kits and systems for nucleic acid amplification. In some embodiments, nucleic acid amplification methods include subjecting the nucleic acid to be amplified to partially denaturing conditions. In some embodiments, nucleic acid amplification methods include amplifying without fully denaturing the nucleic acid that is amplified. In some embodiments, the nucleic acid amplification method employs an enzyme that catalyzes homologous recombination and a polymerase. In some embodiments, methods for nucleic acid amplification can be conducted in a single reaction vessel and/or in a single continuous liquid phase of a reaction mixture, without need for compartmentalization of the reaction mixture or immobilization of reaction components. In some embodiments, methods for nucleic acid amplification comprise amplifying at least one polynucleotide onto a surface under isothermal amplification conditions, optionally in the presence of a polymer which can include a sieving agent and/or a diffusion-reducing agent.
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