公开(公告)号：US20210222240A1

公开(公告)日：2021-07-22

申请号：US17214485

申请日：2021-03-26

申请人： Natera, Inc.

发明人： Solomon MOSHKEVICH ,  Bernhard ZIMMERMANN ,  Tudor Pompiliu CONSTANTIN ,  Huseyin Eser KIRKIZLAR ,  Allison RYAN ,  Styrmir SIGURJONSSON ,  Felipe ACOSTA ARCHILA ,  Ryan SWENERTON

IPC分类号： C12Q1/6869 ,  C12Q1/6876 ,  C12Q1/6851

摘要： The present disclosure provides methods for determining the status of an allograft within a transplant recipient from genotypic data measured from a mixed sample of DNA comprising DNA from both the transplant recipient and from the donor. The mixed sample of DNA may be preferentially enriched at a plurality of polymorphic loci in a way that minimizes the allelic bias, for example using massively multiplexed targeted PCR.

公开(公告)号：US20210189498A1

公开(公告)日：2021-06-24

申请号：US17196822

申请日：2021-03-09

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Pompiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6883 ,  C12Q1/6811 ,  C12Q1/6848 ,  C12Q1/6809 ,  C12Q1/6851 ,  C12Q1/6844 ,  C12Q1/6855 ,  C12Q1/6874

摘要： The invention provides methods for simultaneously amplifying multiple nucleic acid regions of interest in one reaction volume as well as methods for selecting a library of primers for use in such amplification methods. The invention also provides library of primers with desirable characteristics, such as minimal formation of amplified primer dimers or other non-target amplicons.

公开(公告)号：US20200232037A1

公开(公告)日：2020-07-23

申请号：US16829133

申请日：2020-03-25

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Pompiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6883 ,  C12Q1/6848 ,  C12Q1/6811 ,  C12Q1/6851 ,  C12Q1/6874 ,  C12Q1/6855 ,  C12Q1/6809

摘要： The invention provides methods for simultaneously amplifying multiple nucleic acid regions of interest in one reaction volume as well as methods for selecting a library of primers for use in such amplification methods. The invention also provides library of primers with desirable characteristics, such as minimal formation of amplified primer dimers or other non-target amplicons.

公开(公告)号：US20200208221A1

公开(公告)日：2020-07-02

申请号：US16817117

申请日：2020-03-12

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Pompiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6883 ,  C12Q1/6851 ,  C12Q1/6809 ,  C12Q1/6874 ,  C12Q1/6855 ,  C12Q1/6848 ,  C12Q1/6811

摘要： The invention provides methods for simultaneously amplifying multiple nucleic acid regions of interest in one reaction volume as well as methods for selecting a library of primers for use in such amplification methods. The invention also provides library of primers with desirable characteristics, such as minimal formation of amplified primer dimers or other non-target amplicons.

公开(公告)号：US20190309365A1

公开(公告)日：2019-10-10

申请号：US16412353

申请日：2019-05-14

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Pompiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6883 ,  C12Q1/6874 ,  C12Q1/6855 ,  C12Q1/6848 ,  C12Q1/6811

摘要： The invention provides methods for simultaneously amplifying multiple nucleic acid regions of interest in one reaction volume as well as methods for selecting a library of primers for use in such amplification methods. The invention also provides library of primers with desirable characteristics, such as minimal formation of amplified primer dimers or other non-target amplicons.

公开(公告)号：US20190271043A1

公开(公告)日：2019-09-05

申请号：US16412331

申请日：2019-05-14

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Pompiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6883 ,  C12Q1/6848 ,  C12Q1/6811

摘要： The invention provides methods for simultaneously amplifying multiple nucleic acid regions of interest in one reaction volume as well as methods for selecting a library of primers for use in such amplification methods. The invention also provides library of primers with desirable characteristics, such as minimal formation of amplified primer dimers or other non-target amplicons.

公开(公告)号：US20190256919A1

公开(公告)日：2019-08-22

申请号：US16399947

申请日：2019-04-30

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Popiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6883 ,  C12Q1/6848 ,  C12Q1/6811

摘要： The invention provides methods for simultaneously amplifying multiple nucleic acid regions of interest in one reaction volume as well as methods for selecting a library of primers for use in such amplification methods. The invention also provides library of primers with desirable characteristics, such as minimal formation of amplified primer dimers or other non-target amplicons.

公开(公告)号：US20230042405A1

公开(公告)日：2023-02-09

申请号：US17959543

申请日：2022-10-04

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Pompiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6886 ,  G06N20/00 ,  G16B15/00 ,  G16B25/00 ,  G16B40/00 ,  C12Q1/6869 ,  G16B40/20 ,  G16B20/10 ,  G16B20/00 ,  G16B20/20 ,  G16Z99/00 ,  G16H50/20 ,  G06N7/00 ,  G16H10/40

摘要： The invention provides methods, systems, and computer readable medium for detecting ploidy of chromosome segments or entire chromosomes, for detecting single nucleotide variants and for detecting both ploidy of chromosome segments and single nucleotide variants. In some aspects, the invention provides methods, systems, and computer readable medium for detecting cancer or a chromosomal abnormality in a gestating fetus.

公开(公告)号：US20220403461A1

公开(公告)日：2022-12-22

申请号：US17845169

申请日：2022-06-21

申请人： Natera, Inc.

发明人： Huseyin Eser KIRKIZLAR ,  Raheleh SALARI ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN ,  Allison RYAN ,  Naresh VANKAYALAPATI

IPC分类号： C12Q1/6858 ,  G16B20/00 ,  C12Q1/6869 ,  G16B20/10 ,  G16H10/40 ,  C12Q1/6886

摘要： The invention provides improved methods, compositions, and kits for detecting ploidy of chromosome regions, e.g. for detecting cancer or a chromosomal abnormality in a gestating fetus. The methods can utilize a set of more than 200 SNPs that are found within haploblocks and can include analyzing a series of target chromosomal regions related to cancer or a chromosomal abnormality in a gestating fetus. Finally the method may use knowledge about chromosome crossover locations or a best fit algorithm for the analysis. The compositions may comprise more than 200 primers located within haplotype blocks known to show CNV.

公开(公告)号：US20220033909A1

公开(公告)日：2022-02-03

申请号：US17505588

申请日：2021-10-19

申请人： Natera, Inc.

发明人： Joshua BABIARZ ,  Tudor Pompiliu CONSTANTIN ,  Lane A. EUBANK ,  George GEMELOS ,  Matthew Micah HILL ,  Huseyin Eser KIRKIZLAR ,  Matthew RABINOWITZ ,  Onur SAKARYA ,  Styrmir SIGURJONSSON ,  Bernhard ZIMMERMANN

IPC分类号： C12Q1/6883 ,  C12Q1/6811 ,  C12Q1/6848 ,  C12Q1/6809 ,  C12Q1/6851 ,  C12Q1/6844 ,  C12Q1/6869 ,  C12Q1/6855 ,  C12Q1/6874

摘要： The invention provides methods for simultaneously amplifying multiple nucleic acid regions of interest in one reaction volume as well as methods for selecting a library of primers for use in such amplification methods. The invention also provides library of primers with desirable characteristics, such as minimal formation of amplified primer dimers or other non-target amplicons.