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公开(公告)号:US20140309128A1
公开(公告)日:2014-10-16
申请号:US14210199
申请日:2014-03-13
Applicant: Bio-Rad Laboratories, Inc.
Inventor: John Regan , Samantha Cooper , Austin So , Ryan Koehler , Luz Montesclaros
IPC: C12Q1/68
CPC classification number: C12Q1/6858 , C12Q2545/114 , C12Q2561/101 , C12Q2563/159
Abstract: Provided herein are methods, compositions, and kits for detecting alleles using a single probe or a single primer set. Also, provided herein are methods, compositions, and kits for detecting allelic variants using a single probe or a single primer set. Also, provided herein are methods, compositions, and kits for determining a polymerization error rate.
Abstract translation: 本文提供了使用单个探针或单一引物组检测等位基因的方法,组合物和试剂盒。 此外,本文提供的是使用单个探针或单个引物组检测等位基因变体的方法,组合物和试剂盒。 此外,本文提供了用于确定聚合误差率的方法,组合物和试剂盒。
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公开(公告)号:US12024737B2
公开(公告)日:2024-07-02
申请号:US17396148
申请日:2021-08-06
Applicant: Bio-Rad Laboratories, Inc.
Inventor: John F. Regan , Dianna Maar , Dawne N. Shelton , Tina C. Legler , Samantha Cooper , Wei Yang , Eli A. Hefner , Niels Klitgord
IPC: C12Q1/68 , C12Q1/6818 , C12Q1/6823 , C12Q1/6848
CPC classification number: C12Q1/6818 , C12Q1/6823 , C12Q1/6848 , C12Q1/6818 , C12Q2527/107 , C12Q2565/1015 , C12Q1/6823 , C12Q2537/1373 , C12Q2545/107 , C12Q2565/101
Abstract: Method of analysis for alleles of a target. In the method, a plurality of fluid volumes may be formed. Each fluid volume may contain a first primer pair to amplify a first allele of a target, a second primer pair to amplify a second allele of the target, a first reporter including a first photoluminophore and providing a primer of the first primer pair, and a second reporter including a second photoluminophore and providing a primer of the second primer pair. Each of the first and second reporters may include an oligomer having a quencher, and the oligomer may be configured to base-pair with the primer of the first primer pair and the primer of the second primer pair. The first and second alleles may be amplified using the first and second primer pairs. Photoluminescence may be detected. A level of each allele may be determined.
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公开(公告)号:US11085070B2
公开(公告)日:2021-08-10
申请号:US16834854
申请日:2020-03-30
Applicant: Bio-Rad Laboratories, Inc.
Inventor: John F. Regan , Dianna Maar , Dawne N. Shelton , Tina C. Legler , Samantha Cooper , Wei Yang , Eli A. Hefner , Niels Klitgord
IPC: C12Q1/68 , C12Q1/6818 , C12Q1/6823 , C12Q1/6848
Abstract: System, including methods, apparatus, and compositions, for performing amplification assays with an amplification reporter including a first oligomer and a second oligomer capable of base-pairing with one another below a melting temperature of the reporter. The reporter may have a detectable photoluminescence that is affected, such as reduced, by base-pairing of the first and second oligomers with one another. A target, such as a nucleic acid target sequence, may be amplified in at least one volume, such as a plurality of partitions, above the melting temperature, and photoluminescence of the reporter may be detected from the at least one volume below the melting temperature. A property of the target, such as a concentration of the target, may be determined based on the photoluminescence detected.
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公开(公告)号:US20160208319A1
公开(公告)日:2016-07-21
申请号:US14991818
申请日:2016-01-08
Applicant: Bio-Rad Laboratories, Inc. , J. David Gladstone Institutes
Inventor: Jennifer Berman , Samantha Cooper , George Karlin-Neumann , Yuichiro Miyaoka , Bruce Conklin , Josh Shinoff
IPC: C12Q1/68
CPC classification number: C12Q1/6827 , C12N15/102 , C12N15/63 , C12Q1/6809 , C12Q2537/143 , C12Q2563/159 , C12Q2565/101
Abstract: Methods, compositions, and kits are provided for quantification of genome editing.
Abstract translation: 提供方法,组合物和试剂盒用于定量基因组编辑。
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公开(公告)号:US11236383B2
公开(公告)日:2022-02-01
申请号:US16352600
申请日:2019-03-13
Applicant: Bio-Rad Laboratories, Inc. , J. David Gladstone Institutes
Inventor: Jennifer Berman , Samantha Cooper , George Karlin-Neumann , Yuichiro Miyaoka , Bruce Conklin , Josh Shinoff
IPC: C12Q1/68 , C12Q1/6827 , C12Q1/6809 , C12N15/10 , C12N15/63
Abstract: Methods, compositions, and kits are provided for quantification of genome editing.
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公开(公告)号:US11066698B2
公开(公告)日:2021-07-20
申请号:US15046297
申请日:2016-02-17
Applicant: Bio-Rad Laboratories, Inc.
Inventor: Dianna Maar , Samantha Cooper , Wei Yang
IPC: C12Q1/6851 , C12Q1/6827 , C12Q1/6848 , C12Q1/6806 , C12Q1/686
Abstract: Methods of detecting or quantifying short RNA or DNA molecules using split cycle amplification are provided.
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公开(公告)号:US09868981B2
公开(公告)日:2018-01-16
申请号:US15181173
申请日:2016-06-13
Applicant: Bio-Rad Laboratories, Inc.
Inventor: Samantha Cooper , Wei Yang , Jennifer Berman
CPC classification number: C12Q1/6827 , G06F19/22 , C12Q2537/16 , C12Q2545/107
Abstract: Methods and compositions for detecting an allelic form of a target. In an exemplary method, partitions may be created that collectively contain at least one first allelic form and a second allelic form of a target. Each partition may contain (i) a same probe capable of binding specifically to each of the first and second allelic forms of the target and (ii) a competitor configured to bind selectively to the second allelic form relative to the first allelic form and to block binding of the probe to the second allelic form. The first allelic form of the target may be amplified in the partitions. A signal may be detected from a label of the probe while the label is contained by the partitions. A number of partitions that are positive (or negative) for the at least one first allelic form may be determined based on the signal.
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公开(公告)号:US10280451B2
公开(公告)日:2019-05-07
申请号:US14991818
申请日:2016-01-08
Applicant: Bio-Rad Laboratories, Inc. , J. David Gladstone Institutes
Inventor: Jennifer Berman , Samantha Cooper , George Karlin-Neumann , Yuichiro Miyaoka , Bruce Conklin , Josh Shinoff
IPC: C12Q1/68 , C12Q1/6827 , C12Q1/6809 , C12N15/10 , C12N15/63
Abstract: Methods, compositions, and kits are provided for quantification of genome editing.
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公开(公告)号:US10066256B2
公开(公告)日:2018-09-04
申请号:US15073388
申请日:2016-03-17
Applicant: Bio-Rad Laboratories, Inc.
Inventor: Yann Jouvenot , Nick Heredia , Viresh Patel , Samantha Cooper , Jen Berman , Eli Hefner
IPC: C12Q1/68 , C12Q1/6806 , C12Q1/6809 , C12Q1/6827
Abstract: Methods, compositions, and kits are provided for quantifying a number or frequency of double stranded breaks in the genome of a cell or in the genomes of a population of cells.
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公开(公告)号:US09347095B2
公开(公告)日:2016-05-24
申请号:US14210199
申请日:2014-03-13
Applicant: Bio-Rad Laboratories, Inc.
Inventor: John Regan , Samantha Cooper , Austin So , Ryan Koehler , Luz Montesclaros
CPC classification number: C12Q1/6858 , C12Q2545/114 , C12Q2561/101 , C12Q2563/159
Abstract: Provided herein are methods, compositions, and kits for detecting alleles using a single probe or a single primer set. Also, provided herein are methods, compositions, and kits for detecting allelic variants using a single probe or a single primer set. Also, provided herein are methods, compositions, and kits for determining a polymerization error rate.
Abstract translation: 本文提供了使用单个探针或单一引物组检测等位基因的方法,组合物和试剂盒。 此外,本文提供的是使用单个探针或单个引物组检测等位基因变体的方法,组合物和试剂盒。 此外,本文提供了用于确定聚合误差率的方法,组合物和试剂盒。
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