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公开(公告)号:US09970052B2
公开(公告)日:2018-05-15
申请号:US14191295
申请日:2014-02-26
发明人: Duc Do , Claudia Litterst , Dianna Maar
CPC分类号: C12Q1/686 , C12Q1/6844 , G01N21/6408
摘要: Digital assay system, including methods, apparatus, and compositions, for assay of one or more targets in a set of partitions containing a generic reporter of target amplification.
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公开(公告)号:US20170191124A1
公开(公告)日:2017-07-06
申请号:US15393103
申请日:2016-12-28
发明人: Nicholas Heredia , Dianna Maar
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6865 , C12Q1/6816 , C12Q1/6827 , C12Q1/6848 , C12Q1/6851 , C12Q1/6853 , C12Q1/6858 , C12Q2527/107 , C12Q2537/143 , C12Q2565/1015
摘要: Methods and compositions are provided for improved nucleic acid amplification assays.
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公开(公告)号:US09217175B2
公开(公告)日:2015-12-22
申请号:US14171761
申请日:2014-02-03
发明人: John F. Regan , Svilen S. Tzonev , Yann Jouvenot , Claudia Litterst , Dianna Maar , Geoff McDermott
CPC分类号: C12Q1/6851 , C12Q2537/143 , C12Q2537/165 , C12Q2545/107
摘要: Digital assay system, including methods, apparatus, and compositions, for performing target assays in partitions each containing a generic reporter and a specific reporter for target amplification.
摘要翻译: 数字测定系统,包括方法,装置和组合物,用于在每个含有通用报道分子和用于靶扩增的特异性报道分子的分区中进行靶分析。
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公开(公告)号:US12024737B2
公开(公告)日:2024-07-02
申请号:US17396148
申请日:2021-08-06
发明人: John F. Regan , Dianna Maar , Dawne N. Shelton , Tina C. Legler , Samantha Cooper , Wei Yang , Eli A. Hefner , Niels Klitgord
IPC分类号: C12Q1/68 , C12Q1/6818 , C12Q1/6823 , C12Q1/6848
CPC分类号: C12Q1/6818 , C12Q1/6823 , C12Q1/6848 , C12Q1/6818 , C12Q2527/107 , C12Q2565/1015 , C12Q1/6823 , C12Q2537/1373 , C12Q2545/107 , C12Q2565/101
摘要: Method of analysis for alleles of a target. In the method, a plurality of fluid volumes may be formed. Each fluid volume may contain a first primer pair to amplify a first allele of a target, a second primer pair to amplify a second allele of the target, a first reporter including a first photoluminophore and providing a primer of the first primer pair, and a second reporter including a second photoluminophore and providing a primer of the second primer pair. Each of the first and second reporters may include an oligomer having a quencher, and the oligomer may be configured to base-pair with the primer of the first primer pair and the primer of the second primer pair. The first and second alleles may be amplified using the first and second primer pairs. Photoluminescence may be detected. A level of each allele may be determined.
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公开(公告)号:US11898201B2
公开(公告)日:2024-02-13
申请号:US17148440
申请日:2021-01-13
发明人: Nicholas Heredia , Dianna Maar
IPC分类号: C12Q1/68 , C12Q1/6865 , C12Q1/6816 , C12Q1/6858 , C12Q1/6827 , C12Q1/6848 , C12Q1/6851 , C12Q1/6853
CPC分类号: C12Q1/6865 , C12Q1/6816 , C12Q1/6827 , C12Q1/6848 , C12Q1/6851 , C12Q1/6853 , C12Q1/6858 , C12Q1/6858 , C12Q2527/107 , C12Q2537/143 , C12Q1/6816 , C12Q2565/1015
摘要: Methods and compositions are provided for improved nucleic acid amplification assays. In some embodiments, the nucleic acid amplification assay is a tagged amplicon primer extension (TAPE) nucleic acid amplification reaction.
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公开(公告)号:US11085070B2
公开(公告)日:2021-08-10
申请号:US16834854
申请日:2020-03-30
发明人: John F. Regan , Dianna Maar , Dawne N. Shelton , Tina C. Legler , Samantha Cooper , Wei Yang , Eli A. Hefner , Niels Klitgord
IPC分类号: C12Q1/68 , C12Q1/6818 , C12Q1/6823 , C12Q1/6848
摘要: System, including methods, apparatus, and compositions, for performing amplification assays with an amplification reporter including a first oligomer and a second oligomer capable of base-pairing with one another below a melting temperature of the reporter. The reporter may have a detectable photoluminescence that is affected, such as reduced, by base-pairing of the first and second oligomers with one another. A target, such as a nucleic acid target sequence, may be amplified in at least one volume, such as a plurality of partitions, above the melting temperature, and photoluminescence of the reporter may be detected from the at least one volume below the melting temperature. A property of the target, such as a concentration of the target, may be determined based on the photoluminescence detected.
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公开(公告)号:US20180363041A1
公开(公告)日:2018-12-20
申请号:US16013845
申请日:2018-06-20
发明人: Dianna Maar
IPC分类号: C12Q1/6848 , C12Q1/6832
摘要: Methods and compositions for detecting genetic instability using digital amplification assays. The methods may be performed in a set of isolated volumes and generally may involve competitive hybridization of a competitor and a probe/primer with a normal allele and one or more mutant alleles of a microsatellite locus. The competitor may be configured to compete similarly with, or to outcompete, the primer/probe for hybridization with the normal allele. The primer/probe may be configured to outcompete the competitor for hybridization with various mutant alleles of the locus that alter the length of the repetitive sequence by different amounts. Isolated volumes in which the primer/probe outcompetes the competitor may be enumerated, and represent one or more of the mutant alleles. The methods may enable diagnosing microsatellite instability and treating a subject based on the diagnosis.
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公开(公告)号:US11377684B2
公开(公告)日:2022-07-05
申请号:US15973243
申请日:2018-05-07
发明人: Duc Do , Claudia Litterst , Dianna Maar
IPC分类号: C12Q1/68 , C12Q1/686 , C12Q1/6844 , G01N21/64
摘要: Digital assay system, including methods, apparatus, and compositions, for assay of one or more targets in a set of partitions containing a generic reporter of target amplification.
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公开(公告)号:US11104938B2
公开(公告)日:2021-08-31
申请号:US16013845
申请日:2018-06-20
发明人: Dianna Maar
IPC分类号: C12Q1/68 , C12Q1/6848 , C12Q1/6832 , C12Q1/6858
摘要: Methods and compositions for detecting genetic instability using digital amplification assays. The methods may be performed in a set of isolated volumes and generally may involve competitive hybridization of a competitor and a probe/primer with a normal allele and one or more mutant alleles of a microsatellite locus. The competitor may be configured to compete similarly with, or to outcompete, the primer/probe for hybridization with the normal allele. The primer/probe may be configured to outcompete the competitor for hybridization with various mutant alleles of the locus that alter the length of the repetitive sequence by different amounts. Isolated volumes in which the primer/probe outcompetes the competitor may be enumerated, and represent one or more of the mutant alleles. The methods may enable diagnosing microsatellite instability and treating a subject based on the diagnosis.
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公开(公告)号:US10920270B2
公开(公告)日:2021-02-16
申请号:US16361704
申请日:2019-03-22
发明人: Nicholas Heredia , Dianna Maar
IPC分类号: C12Q1/68 , C12Q1/6865 , C12Q1/6816 , C12Q1/6858 , C12Q1/6827 , C12Q1/6848 , C12Q1/6851 , C12Q1/6853
摘要: Methods and compositions are provided for improved nucleic acid amplification assays. In some embodiments, the nucleic acid amplification assay is a tagged amplicon primer extension (TAPE) nucleic acid amplification reaction.
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