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公开(公告)号:US20090246788A1
公开(公告)日:2009-10-01
申请号:US12408485
申请日:2009-03-20
申请人: Thomas Albert , Jigar Patel , Victor Lyamichev
发明人: Thomas Albert , Jigar Patel , Victor Lyamichev
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6827 , C12Q1/6837 , C12Q2525/301 , C12Q2521/501 , C12Q2521/301 , C12Q2561/109
摘要: The present disclosure provides methods and systems for sequence specific nucleic acid target capture comprising enzymatic reactions. The present disclosure relates to a plurality of oligonucleotide probes for capture and subsequent detection of target nucleic acid sequences, using flap endonucleases, ligases, and/or additional enzymes, proteins or compounds, on substrates, for example microarray slides, and in solution formats.
摘要翻译: 本公开提供了包含酶反应的序列特异性核酸靶捕获的方法和系统。 本公开涉及用于捕获和随后检测靶核酸序列的多个寡核苷酸探针,其在底物(例如微阵列载玻片)上以溶液形式,使用翼内切核酸酶,连接酶和/或其它酶,蛋白质或化合物。
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公开(公告)号:US20060199202A1
公开(公告)日:2006-09-07
申请号:US11349872
申请日:2006-02-08
申请人: Victor Lyamichev , Hatim Allawi
发明人: Victor Lyamichev , Hatim Allawi
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6827 , C12Q2561/109 , C12Q2545/114
摘要: The present invention provides compositions and methods for the detection and characterization of allelic expression imbalance from a heterozygous gene locus. More particularly, the present invention provides compositions, kits, and methods for the determination of allelic expression imbalance by the comparison of expression levels from each of two alleles of a given gene locus through the use of an invasive cleavage structure assay (e.g. the INVADER assay).
摘要翻译: 本发明提供了用于检测和表征杂合基因座的等位基因表达不平衡的组合物和方法。 更具体地,本发明通过使用侵入性切割结构测定法(例如INVADER测定法)来比较来自给定基因位点的两个等位基因中的每一个的表达水平来确定等位基因表达失衡的组合物,试剂盒和方法 )。
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公开(公告)号:US20060183109A1
公开(公告)日:2006-08-17
申请号:US11198675
申请日:2005-08-05
申请人: James Dahlberg , Mary Brow , Victor Lyamichev
发明人: James Dahlberg , Mary Brow , Victor Lyamichev
CPC分类号: C12N9/1252 , C12Q1/682 , C12Q1/6846 , C12Q2537/149 , C12Q2525/301 , C12Q2521/319
摘要: The present invention relates to means for cleaving a nucleic acid cleavage structure in a site-specific manner. Enzymes, including 5′ nucleases and 3′ exonucleases, are used to detect and identify nucleic acids derived from microorganisms. Methods are provided which allow for the detection and identification of bacterial and viral pathogens in a sample.
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44.
公开(公告)号:US20050003432A1
公开(公告)日:2005-01-06
申请号:US10897793
申请日:2004-07-23
申请人: Jeff Hall , Victor Lyamichev , Andrea Mast , Mary Brow , Robert Kwiatkowski , Stephanie Vavra
发明人: Jeff Hall , Victor Lyamichev , Andrea Mast , Mary Brow , Robert Kwiatkowski , Stephanie Vavra
CPC分类号: C12N9/1252 , C12N9/22 , C12Q1/6823 , C12Q1/683 , C12Q1/701 , C12Q1/703 , C12Q1/706 , Y10S435/81 , C12Q2561/109
摘要: The present invention relates to means for the detection and characterization of nucleic acid sequences, as well as variations in nucleic acid sequences. The present invention also relates to methods for forming a nucleic acid cleavage structure on a target sequence and cleaving the nucleic acid cleavage structure in a site-specific manner. The structure-specific nuclease activity of a variety of enzymes is used to cleave the target-dependent cleavage structure, thereby indicating the presence of specific nucleic acid sequences or specific variations thereof. The present invention further relates to methods and devices for the separation of nucleic acid molecules based on charge. The present invention also provides methods for the detection of non-target cleavage products via the formation of a complete and activated protein binding region. The invention further provides sensitive and specific methods for the detection of nucleic acid from various viruses in a sample.
摘要翻译: 本发明涉及核酸序列的检测和表征以及核酸序列的变化的方法。 本发明还涉及在靶序列上形成核酸切割结构并以位点特异性方式切割核酸切割结构的方法。 使用各种酶的结构特异性核酸酶活性来切割靶依赖性切割结构,从而指示特异性核酸序列的存在或其特定变体。 本发明还涉及基于电荷分离核酸分子的方法和装置。 本发明还提供了通过形成完整和活化的蛋白质结合区域来检测非靶切割产物的方法。 本发明还提供用于检测样品中各种病毒的核酸的敏感和具体方法。
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公开(公告)号:US20070292856A1
公开(公告)日:2007-12-20
申请号:US11489665
申请日:2006-07-19
申请人: Victor Lyamichev , Michael Kaiser , Natalie Lyamichev , Jeff Hall , James Prudent , Mary Brow
发明人: Victor Lyamichev , Michael Kaiser , Natalie Lyamichev , Jeff Hall , James Prudent , Mary Brow
IPC分类号: C12Q1/68
CPC分类号: C12N9/22 , C12Q1/6813 , C12Q2521/301
摘要: The present invention provides novel cleavage agents and polymerases for the cleavage and modification of nucleic acid. The cleavage agents and polymerases find use, for example, for the detection and characterization of nucleic acid sequences and variations in nucleic acid sequences. In some embodiments, the 5′ nuclease activity of a variety of enzymes is used to cleave a target-dependent cleavage structure, thereby indicating the presence of specific nucleic acid sequences or specific variations thereof.
摘要翻译: 本发明提供了用于切割和修饰核酸的新型切割剂和聚合酶。 裂解剂和聚合酶可用于例如核酸序列的检测和表征以及核酸序列的变化。 在一些实施方案中,使用各种酶的5'核酸酶活性来切割靶依赖性切割结构,从而指示特异性核酸序列的存在或其特定变体。
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公开(公告)号:US20070003942A1
公开(公告)日:2007-01-04
申请号:US11183077
申请日:2005-07-15
申请人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Ann Brow , James Dahlberg
发明人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Ann Brow , James Dahlberg
CPC分类号: C12N9/22 , C12Q1/6823 , C12Q1/6827 , C12Q1/683 , Y10S435/81 , Y10S435/822 , C12Q2565/525 , C12Q2561/109 , C12Q2525/301 , C12Q2563/149
摘要: The present invention relates to means for the detection and characterization of nucleic acid sequences, as well as variations in nucleic acid sequences. The present invention also relates to methods for forming a nucleic acid cleavage structure on a target sequence and cleaving the nucleic acid cleavage structure in a site-specific manner. The structure-specific nuclease activity of a variety of enzymes is used to cleave the target-dependent cleavage structure, thereby indicating the presence of specific nucleic acid sequences or specific variations thereof.
摘要翻译: 本发明涉及核酸序列的检测和表征以及核酸序列的变化的方法。 本发明还涉及在靶序列上形成核酸切割结构并以位点特异性方式切割核酸切割结构的方法。 使用各种酶的结构特异性核酸酶活性来切割靶依赖性切割结构,从而指示特异性核酸序列的存在或其特定变体。
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公开(公告)号:US20060292580A1
公开(公告)日:2006-12-28
申请号:US11183015
申请日:2005-07-15
申请人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Ann Brow , James Dahlberg
发明人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Ann Brow , James Dahlberg
CPC分类号: C12N9/22 , C12Q1/6823 , C12Q1/6827 , C12Q1/683 , Y10S435/81 , Y10S435/822 , C12Q2565/525 , C12Q2561/109 , C12Q2525/301 , C12Q2563/149
摘要: The present invention relates to means for the detection and characterization of nucleic acid sequences, as well as variations in nucleic acid sequences. The present invention also relates to methods for forming a nucleic acid cleavage structure on a target sequence and cleaving the nucleic acid cleavage structure in a site-specific manner. The structure-specific nuclease activity of a variety of enzymes is used to cleave the target-dependent cleavage structure, thereby indicating the presence of specific nucleic acid sequences or specific variations thereof.
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公开(公告)号:US20060177835A1
公开(公告)日:2006-08-10
申请号:US11183078
申请日:2005-07-15
申请人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Brow , James Dahlberg
发明人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Brow , James Dahlberg
CPC分类号: C12N9/22 , C12Q1/6823 , C12Q1/6827 , C12Q1/683 , Y10S435/81 , Y10S435/822 , C12Q2565/525 , C12Q2561/109 , C12Q2525/301 , C12Q2563/149
摘要: The present invention relates to means for the detection and characterization of nucleic acid sequences, as well as variations in nucleic acid sequences. The present invention also relates to methods for forming a nucleic acid cleavage structure on a target sequence and cleaving the nucleic acid cleavage structure in a site-specific manner. The structure-specific nuclease activity of a variety of enzymes is used to cleave the target-dependent cleavage structure, thereby indicating the presence of specific nucleic acid sequences or specific variations thereof.
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公开(公告)号:US20060154269A1
公开(公告)日:2006-07-13
申请号:US11182336
申请日:2005-07-15
申请人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Ann Brow , James Dahlberg
发明人: James Prudent , Jeff Hall , Victor Lyamichev , Mary Ann Brow , James Dahlberg
CPC分类号: C12N9/22 , C12Q1/6823 , C12Q1/6827 , C12Q1/683 , Y10S435/81 , Y10S435/822 , C12Q2565/525 , C12Q2561/109 , C12Q2525/301 , C12Q2563/149
摘要: The present invention relates to means for the detection and characterization of nucleic acid sequences, as well as variations in nucleic acid sequences. The present invention also relates to methods for forming a nucleic acid cleavage structure on a target sequence and cleaving the nucleic acid cleavage structure in a site-specific manner. The structure-specific nuclease activity of a variety of enzymes is used to cleave the target-dependent cleavage structure, thereby indicating the presence of specific nucleic acid sequences or specific variations thereof.
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公开(公告)号:US20060068383A1
公开(公告)日:2006-03-30
申请号:US09941095
申请日:2001-08-28
申请人: James Dahlberg , Mary Brow , Victor Lyamichev
发明人: James Dahlberg , Mary Brow , Victor Lyamichev
CPC分类号: C12N15/113 , C07H21/00 , C07K14/4746 , C07K14/82 , C12N9/1252 , C12N15/10 , C12Q1/68 , C12Q1/682 , C12Q1/6823 , C12Q1/6827 , C12Q1/683 , C12Q1/6853 , C12Q1/686 , C12Q1/689 , C12Q1/705 , Y10T436/143333 , C12Q2537/149 , C12Q2525/301 , C12Q2521/319
摘要: The present invention relates to means for cleaving a nucleic acid cleavage structure in a site-specific manner. Enzymes, including 5′ nucleases and 3′ exonucleases, are used to detect and identify nucleic acids derived from microorganisms. Methods are provided which allow for the detection and identification of bacterial and viral pathogens in a sample.
摘要翻译: 本发明涉及以位点特异性方式切割核酸切割结构的方法。 酶包括5'核酸酶和3'核酸外切酶,用于检测和鉴定衍生自微生物的核酸。 提供了允许在样品中检测和鉴定细菌和病毒病原体的方法。
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