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公开(公告)号:US08906626B2
公开(公告)日:2014-12-09
申请号:US13604872
申请日:2012-09-06
申请人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
发明人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
CPC分类号: C12Q1/6876 , C12Q1/6834 , C12Q1/6837 , C12Q2600/16 , Y10T436/143333 , C12Q2525/155 , C12Q2563/131 , C12Q2563/179
摘要: A method for detecting nucleic acids by (a) providing a sample having target nucleic acids, each nucleic acid having contiguous first, second, and third domains; (b) contacting the sample with probe sets to form hybridization complexes, wherein each probe set includes (i) a first probe having a sequence that is complementary to the first domain; and (ii) a second probe having a sequence substantially complementary to the third domain; (c) extending the first probes along the second domains of the complexes while the complexes are immobilized on a solid support; (d) ligating the extended first probes to the second probes to form templates; (e) amplifying the templates with primers that are complementary to the first and second priming sequences to produce amplicons; and (f) detecting the amplicons on the surface of a nucleic acid array.
摘要翻译: 一种用于通过(a)提供具有靶核酸的样品来检测核酸的方法,每个核酸具有连续的第一,第二和第三结构域; (b)使样品与探针组接触以形成杂交复合物,其中每个探针组包括(i)具有与第一结构域互补的序列的第一探针; 和(ii)具有与第三结构域基本上互补的序列的第二探针; (c)沿络合物的第二结构域扩展第一探针,同时将复合物固定在固体支持物上; (d)将扩展的第一探针连接到第二探针以形成模板; (e)用与第一和第二引物序列互补的引物扩增模板以产生扩增子; 和(f)检测核酸阵列表面上的扩增子。
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公开(公告)号:US08288103B2
公开(公告)日:2012-10-16
申请号:US12790757
申请日:2010-05-28
申请人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
发明人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
CPC分类号: C12Q1/6876 , C12Q1/6834 , C12Q1/6837 , C12Q2600/16 , Y10T436/143333 , C12Q2525/155 , C12Q2563/131 , C12Q2563/179
摘要: The invention is directed to a variety of multiplexing methods used to amplify and/or genotype a variety of samples simultaneously.
摘要翻译: 本发明涉及用于同时扩增和/或基因型多种样品的多种多样化方法。
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公开(公告)号:US08003354B2
公开(公告)日:2011-08-23
申请号:US12032581
申请日:2008-02-15
申请人: Min-Jui Richard Shen , Arnold Oliphant , Scott L. Butler , John R. Stuelpnagel , Mark S. Chee , Kenneth M. Kuhn , Jian-Bing Fan
发明人: Min-Jui Richard Shen , Arnold Oliphant , Scott L. Butler , John R. Stuelpnagel , Mark S. Chee , Kenneth M. Kuhn , Jian-Bing Fan
CPC分类号: C12Q1/6827 , C12Q1/6858 , C12Q2535/125 , C12Q2537/143 , C12Q2561/125 , C12Q2565/515
摘要: The invention is directed to a variety of multiplexing methods used to amplify and/or genotype a variety of samples simultaneously.
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公开(公告)号:US20130244882A1
公开(公告)日:2013-09-19
申请号:US13604872
申请日:2012-09-06
申请人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
发明人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6876 , C12Q1/6834 , C12Q1/6837 , C12Q2600/16 , Y10T436/143333 , C12Q2525/155 , C12Q2563/131 , C12Q2563/179
摘要: A method for detecting nucleic acids by (a) providing a sample having target nucleic acids, each nucleic acid having contiguous first, second, and third domains; (b) contacting the sample with probe sets to form hybridization complexes, wherein each probe set includes (i) a first probe having a sequence that is complementary to the first domain; and (ii) a second probe having a sequence substantially complementary to the third domain; (c) extending the first probes along the second domains of the complexes while the complexes are immobilized on a solid support; (d) ligating the extended first probes to the second probes to form templates; (e) amplifying the templates with primers that are complementary to the first and second priming sequences to produce amplicons; and (f) detecting the amplicons on the surface of a nucleic acid array.
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公开(公告)号:US20100311064A1
公开(公告)日:2010-12-09
申请号:US12790757
申请日:2010-05-28
申请人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
发明人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
CPC分类号: C12Q1/6876 , C12Q1/6834 , C12Q1/6837 , C12Q2600/16 , Y10T436/143333 , C12Q2525/155 , C12Q2563/131 , C12Q2563/179
摘要: The invention is directed to a variety of multiplexing methods used to amplify and/or genotype a variety of samples simultaneously.
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公开(公告)号:US07582420B2
公开(公告)日:2009-09-01
申请号:US10194958
申请日:2002-07-12
申请人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
发明人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
CPC分类号: C12Q1/6876 , C12Q1/6834 , C12Q1/6837 , C12Q2600/16 , Y10T436/143333 , C12Q2525/155 , C12Q2563/131 , C12Q2563/179
摘要: The invention is directed to a variety of multiplexing methods used to amplify and/or genotype a variety of samples simultaneously.
摘要翻译: 本发明涉及用于同时扩增和/或基因型多种样品的多种多样化方法。
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公开(公告)号:US20100015626A1
公开(公告)日:2010-01-21
申请号:US12507022
申请日:2009-07-21
申请人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
发明人: Arnold Oliphant , John R. Stuelpnagel , Mark S. Chee , Scott L. Butler , Jian-Bing Fan , Min-Jui Richard Shen
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6876 , C12Q1/6834 , C12Q1/6837 , C12Q2600/16 , Y10T436/143333 , C12Q2525/155 , C12Q2563/131 , C12Q2563/179
摘要: The invention is directed to a variety of multiplexing methods used to amplify and/or genotype a variety of samples simultaneously.
摘要翻译: 本发明涉及用于同时扩增和/或基因型多种样品的多种多样化方法。
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公开(公告)号:US20080242555A1
公开(公告)日:2008-10-02
申请号:US12032581
申请日:2008-02-15
申请人: Min-Jui Richard Shen , Arnold Oliphant , Scott L. Butler , John R. Stuelpnagel , Mark S. Chee , Kenneth M. Kuhn , Jian-Bing Fan
发明人: Min-Jui Richard Shen , Arnold Oliphant , Scott L. Butler , John R. Stuelpnagel , Mark S. Chee , Kenneth M. Kuhn , Jian-Bing Fan
IPC分类号: C40B30/04
CPC分类号: C12Q1/6827 , C12Q1/6858 , C12Q2535/125 , C12Q2537/143 , C12Q2561/125 , C12Q2565/515
摘要: The invention is directed to a variety of multiplexing methods used to amplify and/or genotype a variety of samples simultaneously.
摘要翻译: 本发明涉及用于同时扩增和/或基因型多种样品的多种多样化方法。
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公开(公告)号:US06890741B2
公开(公告)日:2005-05-10
申请号:US09915231
申请日:2001-07-24
申请人: Jian-Bing Fan , John R. Stuelpnagel , Mark S. Chee
发明人: Jian-Bing Fan , John R. Stuelpnagel , Mark S. Chee
IPC分类号: G01N33/53 , C07H21/02 , C07H21/04 , C12N15/09 , C12P19/34 , C12Q1/68 , G01N33/00 , G01N33/566
CPC分类号: C12Q1/6816 , C12Q1/6809 , C12Q1/682 , C12Q1/6834 , C12Q1/6837 , C12Q1/6853 , C12Q1/6858 , C12Q1/6862 , Y10T436/143333 , C12Q2563/179 , C12Q2533/107 , C12Q2525/173 , C12Q2565/519 , C12Q2525/161 , C12Q2565/501 , C12Q2531/125 , C12Q2563/131 , C12Q2525/155
摘要: The present invention is directed to sensitive and accurate multiplexed assays for target analyte detection.
摘要翻译: 本发明涉及用于靶分析物检测的灵敏且准确的多重测定。
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公开(公告)号:US08486625B2
公开(公告)日:2013-07-16
申请号:US12212585
申请日:2008-09-17
CPC分类号: C12Q1/6837 , C12Q1/6858 , C12Q1/6874 , C12Q2535/131 , C12Q2525/191 , C12Q2531/137 , C12Q2563/149
摘要: The present invention is directed to methods and compositions for the use of microsphere arrays to detect and quantify a number of nucleic acid reactions. The invention finds use in genotyping, i.e. the determination of the sequence of nucleic acids, particularly alterations such as nucleotide substitutions (mismatches) and single nucleotide polymorphisms (SNPs). Similarly, the invention finds use in the detection and quantification of a nucleic acid target using a variety of amplification techniques, including both signal amplification and target amplification. The methods and compositions of the invention can be used in nucleic acid sequencing reactions as well. All applications can include the use of adapter sequences to allow for universal arrays.
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