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公开(公告)号:US20090325172A1
公开(公告)日:2009-12-31
申请号:US12455397
申请日:2009-06-01
申请人: John Milton , Xiaolin Wu , Mark Smith , Joseph Brennan , Colin Barnes , Xiaohai Liu , Silke Ruediger
发明人: John Milton , Xiaolin Wu , Mark Smith , Joseph Brennan , Colin Barnes , Xiaohai Liu , Silke Ruediger
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6869 , C07H1/00 , C07H19/06 , C07H19/10 , C07H19/14 , C07H19/16 , C07H19/20 , C07H21/00 , C12Q2525/186 , C12Q2535/113 , Y02P20/55 , C12Q2525/197
摘要: The invention provides modified nucleotide or nucleoside molecule comprising a purine or pyrimidine base and a ribose or deoxyribose sugar moiety having a removable 3′-OH blocking group covalently attached thereto, such that the 3′ carbon atom has attached a group of the structure —O-Z wherein Z is any of —C(R′)2-O—R″, —C(R′)2-N(R″)2, —C(R′)2-N(H)R″, —C(R′)2-S—R″ and —C(R′)2-F, wherein each R″ is or is part of a removable protecting group; each R′ is independently a hydrogen atom, an alkyl, substituted alkyl, arylalkyl, alkenyl, alkynyl, aryl, heteroaryl, heterocyclic, acyl, cyano, alkoxy, aryloxy, heteroaryloxy or amido group, or a detectable label attached through a linking group; or (R′)2 represents an alkylidene group of formula ═C(R′″)2 wherein each R′″ may be the same or different and is selected from the group comprising hydrogen and halogen atoms and alkyl groups; and wherein said molecule may be reacted to yield an intermediate in which each R″ is exchanged for H or, where Z is —C(R′)2-F, the F is exchanged for OH, SH or NH2, preferably OH, which intermediate dissociates under aqueous conditions to afford a molecule with a free 3′OH; with the proviso that where Z is —C(R′)2-S—R″, both R′ groups are not H.
摘要翻译: 本发明提供了修饰的核苷酸或核苷分子,其包含嘌呤或嘧啶碱基和核糖或脱氧核糖糖部分,其具有共价连接到其上的可移除的3'-OH封闭基团,使得3'碳原子连接有一组结构-OZ 其中Z是-C(R')2 -O-R“,-C(R')2 -N(R”)2,-C(R')2 -N(H)R“ ,-C(R')2 -S-R“和-C(R')2 -F,其中每个R”或是可除去的保护基团的一部分; 每个R'独立地是氢原子,烷基,取代的烷基,芳基烷基,烯基,炔基,芳基,杂芳基,杂环,酰基,氰基,烷氧基,芳氧基,杂芳氧基或酰氨基,或通过连接基团连接的可检测标记; 或(R')2表示式-C(R“')2的亚烷基,其中每个R”可以相同或不同,并且选自氢和卤素原子和烷基; 并且其中所述分子可以反应以产生其中每个R“被交换为H的中间体,或者其中Z是-C(R')2-F,F被交换成OH,SH或NH 2,优选OH, 该中间体在水性条件下解离以得到具有游离3'OH的分子; 条件是其中Z是-C(R')2 -S-R“,两个R'基团都不是H.
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公开(公告)号:US07566537B2
公开(公告)日:2009-07-28
申请号:US11301578
申请日:2005-12-13
申请人: Shankar Balasubramanian , Colin Barnes , Xiaohai Liu , John Milton , Harold Swerdlow , Xiaolin Wu
发明人: Shankar Balasubramanian , Colin Barnes , Xiaohai Liu , John Milton , Harold Swerdlow , Xiaolin Wu
CPC分类号: C07H19/06 , C07H19/10 , C07H19/16 , C07H19/20 , C07H21/00 , C12Q1/6869 , C12Q2525/186 , C12Q2535/113 , C12Q2525/197
摘要: Nucleosides and nucleotides are disclosed that are linked to detectable labels via a cleavable linker group.
摘要翻译: 公开了通过可切割连接基团与可检测标记物连接的核苷和核苷酸。
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公开(公告)号:US20060160081A1
公开(公告)日:2006-07-20
申请号:US10525399
申请日:2003-08-22
申请人: John Milton , Silke Ruediger , Xiaohai Liu
发明人: John Milton , Silke Ruediger , Xiaohai Liu
CPC分类号: C07H19/04 , C07H19/06 , C07H19/10 , C07H19/14 , C07H19/16 , C07H19/20 , C07H21/00 , C07H21/04 , C12Q1/6869 , C12Q1/6874 , Y10T436/143333 , C12Q2535/113 , C12Q2525/186
摘要: The invention provides a nucleotide or nucleoside having a base attached to a detectable label via a cleavable linker, characterised in that the cleavable linker contains a moiety selected from the group comprising: Formula (I) wherein X is selected from the group comprising O, S, NH and NQ wherein Q is a C1-10 substituted or unsubstituted alkyl group, Y is selected from the group comprising O, S, NH and N(allyl), T is hydrogen or a C1-10 substituted or unsubstituted alkyl group and * indicates where the moiety is connected to the remainder of the nucleotide or nucleoside).
摘要翻译: 本发明提供了具有通过可切割接头连接到可检测标记的碱基的核苷酸或核苷,其特征在于可切割连接体含有选自以下的部分:式(I)其中X选自O,S ,NH和NQ,其中Q是C 1-10取代或未取代的烷基,Y选自O,S,NH和N(烯丙基),T是氢或C < 取代或未取代的烷基,*表示部分与核苷酸或核苷的剩余部分连接的位置)。
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公开(公告)号:US20130189743A1
公开(公告)日:2013-07-25
申请号:US13791597
申请日:2013-03-08
IPC分类号: C12P19/34
CPC分类号: C12Q1/6869 , C07H19/10 , C07H19/20 , C07H21/00 , C12P19/34 , C12Q1/6806 , C12Q1/6818 , C12Q1/6823 , C12Q1/6834 , C12Q1/6874 , C12Q1/6876 , C12Q2525/186
摘要: Nucleosides and nucleotides are disclosed that are linked to detectable labels via a cleavable linker group.
摘要翻译: 公开了通过可切割连接基团与可检测标记物连接的核苷和核苷酸。
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公开(公告)号:US08394586B2
公开(公告)日:2013-03-12
申请号:US13432989
申请日:2012-03-28
CPC分类号: C12Q1/6869 , C07H19/10 , C07H19/20 , C07H21/00 , C12P19/34 , C12Q1/6806 , C12Q1/6818 , C12Q1/6823 , C12Q1/6834 , C12Q1/6874 , C12Q1/6876 , C12Q2525/186
摘要: Nucleosides and nucleotides are disclosed that are linked to detectable labels via a cleavable linker group.
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公开(公告)号:US20120100530A1
公开(公告)日:2012-04-26
申请号:US13147171
申请日:2010-01-29
申请人: Ruth Moysey , Michael Knaggs , Lakmal Jayasinghe , James White , Brian Mckeown , John Milton
发明人: Ruth Moysey , Michael Knaggs , Lakmal Jayasinghe , James White , Brian Mckeown , John Milton
CPC分类号: C12N9/22 , C07K14/31 , C07K2319/03 , C12N9/1241 , C12N9/90
摘要: The invention relates to constructs comprising a nucleic acid binding protein and a surface. At least one native accessible cysteine residue is removed from the binding protein. The binding protein is attached to the surface via one or more accessible cysteine residues. The removal of other accessible cysteine residues from the protein allows control attachment to the surface. The constructs can be used to generate transmembrane pores having a nucleic acid binding protein attached thereto. Such pores are particularly useful for sequencing nucleic acids. The enzyme handles the nucleic acid in such a way that the pore can detect each of its component nucleotides by stochastic sensing.
摘要翻译: 本发明涉及包含核酸结合蛋白和表面的构建体。 从结合蛋白中去除至少一种天然存在的半胱氨酸残基。 结合蛋白通过一个或多个可接近的半胱氨酸残基连接到表面。 从蛋白质中去除其他可获得的半胱氨酸残基允许控制附着于表面。 构建体可用于产生具有与其连接的核酸结合蛋白的跨膜孔。 这样的孔特别可用于测序核酸。 酶以这样的方式处理核酸,使得孔可以通过随机感测来检测其每个组分核苷酸。
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公开(公告)号:US08084590B2
公开(公告)日:2011-12-27
申请号:US12803163
申请日:2010-06-21
申请人: John Milton , Silke Ruediger , Xiaohai Liu
发明人: John Milton , Silke Ruediger , Xiaohai Liu
CPC分类号: C07H19/04 , C07H19/06 , C07H19/10 , C07H19/14 , C07H19/16 , C07H19/20 , C07H21/00 , C07H21/04 , C12Q1/6869 , C12Q1/6874 , Y10T436/143333 , C12Q2535/113 , C12Q2525/186
摘要: The invention provides a nucleotide or nucleoside having a base attached to a detectable label via a cleavable linker, characterised in that the cleavable linker contains a moiety selected from the group comprising: Formula (I) (wherein X is selected from the group comprising O, S, NH and NQ wherein Q is a C1-10 substituted or unsubstituted alkyl group, Y is selected from the group comprising O, S, NH and N(allyl). T is hydrogen or a C1-10 substituted or unsubstituted alkyl group and * indicates where the moiety is connected to the remainder of the nucleotide or nucleoside).
摘要翻译: 本发明提供了具有通过可切割接头连接到可检测标记的碱基的核苷酸或核苷,其特征在于所述可切割连接体含有选自以下的部分:式(I)(其中X选自O, S,NH和NQ,其中Q是C1-10取代或未取代的烷基,Y选自O,S,NH和N(烯丙基),T是氢或C1-10取代或未取代的烷基, *表示部分连接到核苷酸或核苷的剩余部分)。
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公开(公告)号:US20110183327A1
公开(公告)日:2011-07-28
申请号:US12804296
申请日:2010-07-19
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6869 , C07H19/10 , C07H19/20 , C07H21/00 , C12P19/34 , C12Q1/6806 , C12Q1/6818 , C12Q1/6823 , C12Q1/6834 , C12Q1/6874 , C12Q1/6876 , C12Q2525/186
摘要: Nucleosides and nucleotides are disclosed that are linked to detectable labels via a cleavable linker group.
摘要翻译: 公开了通过可切割连接基团与可检测标记物连接的核苷和核苷酸。
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公开(公告)号:US20110020827A1
公开(公告)日:2011-01-27
申请号:US12899423
申请日:2010-10-06
申请人: John Milton , Xiaohai Liu
发明人: John Milton , Xiaohai Liu
IPC分类号: C12Q1/68 , C07H19/14 , C07H19/20 , C07D311/88
CPC分类号: C12Q1/686 , C12Q2525/113
摘要: The invention is directed to modified guanine-containing nucleosides and nucleotides and uses thereof. More specifically, the invention relates to modified fluorescently labelled guanine-containing nucleosides and nucleotides which exhibit enhanced fluorophore intensity by virtue of reduced quenching effects.
摘要翻译: 本发明涉及修饰的含鸟嘌呤核苷及其用途。 更具体地,本发明涉及经修饰的荧光标记的含有鸟嘌呤的核苷和核苷酸,其通过降低猝灭效应表现出增强的荧光团强度。
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公开(公告)号:US20100028885A1
公开(公告)日:2010-02-04
申请号:US12460741
申请日:2009-07-23
IPC分类号: C12Q1/68
CPC分类号: C07H19/06 , C07H19/10 , C07H19/16 , C07H19/20 , C07H21/00 , C12Q1/6869 , C12Q2525/186 , C12Q2535/113 , C12Q2525/197
摘要: Nucleosides and nucleotides are disclosed that are linked to detectable labels via a cleavable linker group.
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