Corrective methodology for processing results of transcriptome experiments obtained by differential analysis
    6.
    发明授权
    Corrective methodology for processing results of transcriptome experiments obtained by differential analysis 失效
    通过差异分析获得的转录组实验处理结果的纠正方法

    公开(公告)号:US08086412B2

    公开(公告)日:2011-12-27

    申请号:US12457730

    申请日:2009-06-19

    IPC分类号: G01N33/48 G06F19/00

    CPC分类号: G06F19/20 G06F19/24

    摘要: A corrective method is described for processing results of transcriptome experiments obtained by differential analysis includes the following steps: obtaining the results of the level of expression of genes under a reference condition, and calculating the mean level of expression of each of such genes; obtaining the results of the level of expression of such genes under a treatment condition, and calculating the mean level of expression for each of such genes; calculating the modulation coefficient for the level of expression for each of such genes; calculating a p-value associated with each modulation coefficient; and calculating isobar curves of p-value as a function of the mean level of expression of each of such genes under the reference condition; calculating and associating a median modulation coefficient on the isobar curve of each p-value observed. The processing of results of experiments carried out on DNA chips is also described.

    摘要翻译: 描述了通过差异分析获得的转录组实验处理结果的校正方法,包括以下步骤:获得参考条件下基因表达水平的结果,并计算每个这样的基因的平均表达水平; 在治疗条件下获得这些基因表达水平的结果,并计算每个这样的基因的平均表达水平; 计算每个这样的基因的表达水平的调节系数; 计算与每个调制系数相关联的p值; 并计算p值的等压曲线作为参考条件下每个这样的基因的平均表达水平的函数; 计算和关联每个p值的等压曲线上的中值调制系数。 还描述了对DNA芯片进行的实验结果的处理。

    Corrective methodology for processing results of transcriptome experiments obtained by differential analysis
    7.
    发明申请
    Corrective methodology for processing results of transcriptome experiments obtained by differential analysis 失效
    通过差异分析获得的转录组实验处理结果的纠正方法

    公开(公告)号:US20100057369A1

    公开(公告)日:2010-03-04

    申请号:US12457730

    申请日:2009-06-19

    IPC分类号: G06F19/00

    CPC分类号: G06F19/20 G06F19/24

    摘要: A corrective method for processing results of transcriptome experiments obtained by differential analysis includes the following steps: obtaining the results of the level of expression of genes under a reference condition, and calculating the mean level of expression of each of such genes; obtaining the results of the level of expression of such genes under a treatment condition, and calculating the mean level of expression for each of such genes; calculating the modulation coefficient for the level of expression for each of such genes; calculating a p-value associated with each modulation coefficient; and calculating isobar curves of p-value as a function of the mean level of expression of each of such genes under the reference condition; calculating and associating a median modulation coefficient on the isobar curve of each p-value observed; this method applies in particular to the processing of results of experiments carried out on DNA chips.

    摘要翻译: 通过差异分析获得的转录组实验处理结果的校正方法包括以下步骤:获得参考条件下基因表达水平的结果,并计算各基因的平均表达水平; 在治疗条件下获得这些基因表达水平的结果,并计算每个这样的基因的平均表达水平; 计算每个这样的基因的表达水平的调节系数; 计算与每个调制系数相关联的p值; 并计算p值的等压曲线作为参考条件下每个这样的基因的平均表达水平的函数; 计算和关联每个p值的等压曲线上的中值调制系数; 该方法特别适用于对DNA芯片进行的实验结果的处理。