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公开(公告)号:US20220064684A1
公开(公告)日:2022-03-03
申请号:US17420908
申请日:2020-01-15
Applicant: Genomatica, Inc.
Inventor: Andreas W. SCHIRMER , Katherine Ann MURPHY , Angelica Zabala BAUTISTA
Abstract: The disclosure relates to methods for the production of natural lactones by bacteria under physiological conditions. The methods employ ybgC proteins having lactonizing activity.
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公开(公告)号:US11208673B2
公开(公告)日:2021-12-28
申请号:US16213671
申请日:2018-12-07
Applicant: Genomatica, Inc.
Inventor: Mark J. Burk , Anthony P. Burgard , Robin E. Osterhout , Priti Pharkya
Abstract: The invention provides a non-naturally occurring microbial organism having a 6-aminocaproic acid, caprolactam, hexametheylenediamine or levulinic acid pathway. The microbial organism contains at least one exogenous nucleic acid encoding an enzyme in the respective 6-aminocaproic acid, caprolactam, hexametheylenediamine or levulinic acid pathway. The invention additionally provides a method for producing 6-aminocaproic acid, caprolactam, hexametheylenediamine or levulinic acid. The method can include culturing a 6-aminocaproic acid, caprolactam or hexametheylenediamine producing microbial organism, where the microbial organism expresses at least one exogenous nucleic acid encoding a 6-aminocaproic acid, caprolactam, hexametheylenediamine or levulinic acid pathway enzyme in a sufficient amount to produce the respective product, under conditions and for a sufficient period of time to produce 6-aminocaproic acid, caprolactam, hexametheylenediamine or levulinic acid.
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公开(公告)号:US20210348134A1
公开(公告)日:2021-11-11
申请号:US17280181
申请日:2019-09-25
Applicant: GENOMATICA, INC.
Inventor: Amit SHAH , Joseph WARNER
Abstract: The invention provides polypeptides and encoding nucleic acids of aldehyde dehydrogenase variants. The invention also provides cells expressing aldehyde dehydrogenase variants. The invention further provides methods for producing 3-hydroxybutyraldehyde (3-HBal) and/or 1,3-butanediol (1,3-BDO), or an ester or amide thereof, comprising culturing cells expressing an aldehyde dehydrogenase variant or using lysates of such cells. The invention additional provides methods for producing 4-hydroxybutyraldehyde (4-HBal) and/or 1,4-butanediol (1,4-BDO), or an ester or amide thereof, comprising culturing cells expressing an aldehyde dehydrogenase variant or using lysates of such cells.
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公开(公告)号:US11168046B2
公开(公告)日:2021-11-09
申请号:US16739645
申请日:2020-01-10
Applicant: Genomatica, Inc.
Inventor: Haibo Wang
IPC: C07C33/035 , C07H15/10
Abstract: The disclosure relates to the field of specialty chemicals. In particular, the disclosure provides novel 1,3-fatty-diol compounds and derivatives thereof which are useful e.g., in the production of personal care products, surfactants, detergents, polymers, paints, coatings, and as emulsifiers, emollients, and thickeners in cosmetics and foods, as industrial solvents and plasticizers, etc.
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公开(公告)号:US11060099B2
公开(公告)日:2021-07-13
申请号:US15650285
申请日:2017-07-14
Applicant: Genomatica, Inc.
Inventor: Derek L. Greenfield , Andreas W. Schirmer , Elizabeth J. Clarke , Eli S. Groban , Bernardo M. Da Costa , Zhihao Hu , Kevin Holden , Noah Helman
IPC: C12N1/21 , C12P7/64 , C07K14/195 , C07K14/245 , C12N9/16 , C12N15/70 , C12N9/04 , C12N9/02 , C12N9/10 , C12N9/12 , C12N9/88 , C12N9/90 , C12N9/00 , C12P7/04
Abstract: The invention relates to compositions and methods, including polynucleotide sequences, amino acid sequences, recombinant host cells and recombinant host cell cultures engineered to produce fatty acid derivative compositions comprising fatty acids, fatty alcohols, fatty aldehydes, fatty esters, alkanes, terminal olefins, internal olefins or ketones. The fatty acid derivative composition is produced extracellularly with a higher titer, yield or productivity than the corresponding wild type or non-engineered host cell.
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公开(公告)号:US20210189439A1
公开(公告)日:2021-06-24
申请号:US17053190
申请日:2019-05-03
Applicant: Genomatica, Inc.
Inventor: Andreas W. SCHIRMER , Risha Lindig BOND , Erin Frances PERRY
Abstract: The disclosure relates to the field of specialty chemicals and methods for their synthesis. In embodiments, the disclosure provides novel multifunctional fatty acid derivative molecules such as e.g., fatty triols, fatty tetrols, dihydroxy fatty acids, etc. The disclosure further provides derivatives of the disclosed multifunctional molecules which are useful e.g., in the production of personal care products, surfactants, detergents, polymers, paints, coatings, and as emulsifiers, emollients, and thickeners in cosmetics and foods, as industrial solvents and plasticizers, etc. The disclosure further provides biochemical pathways, recombinant microorganisms and methods for the biological production of various multifunctional fatty acid derivatives.
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公开(公告)号:US20210189373A1
公开(公告)日:2021-06-24
申请号:US17271439
申请日:2019-08-28
Applicant: Genomatica, Inc.
Inventor: Andreas W. SCHIRMER , Katherine Ann MURPHY , Erin Frances PERRY
Abstract: The disclosure relates to the field of specialty chemicals and methods for their synthesis. In embodiments, the disclosure provides viable bacterial cells which comprise heterologous dual 3-hydroxy-acyl-ACP dehydratase/isomerases, etc. The disclosure further provides monounsaturated fatty acid derivative molecules produced by the viable bacterial cells which are non-native to the bacterial cells. The disclosure further provides methods for the preparation and production of non-native monounsaturated fatty acid derivative molecules such as e.g., an ω3-monounsaturated fatty acid derivative, an ω5-monounsaturated fatty acid derivative, an ω9-monounsaturated fatty acid derivative, an ω11-monounsaturated fatty acid fatty acid derivative, etc.
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公开(公告)号:US20210130861A1
公开(公告)日:2021-05-06
申请号:US16927396
申请日:2020-07-13
Applicant: Genomatica, Inc.
Inventor: Lauri H. Suominen , Connor J. Galleher , Michael Japs , Mark J. Burk , Cara Tracewell
Abstract: Provided is a method of producing and isolating a diamine produced by microbial fermentation that minimizes undesirable salt formation to provide a lower cost process.
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公开(公告)号:US20210071207A1
公开(公告)日:2021-03-11
申请号:US16889211
申请日:2020-06-01
Applicant: Genomatica, Inc.
Inventor: Andreas W. Schirmer , Noah HELMAN , Haibo Wang , Zhihao Hu , Vikranth Arlagadda , Alma Itzel RAMOS-SOLIS , Elizabeth Clarke
Abstract: The disclosure relates to fatty diols and recombinant microorganisms for producing them. More particularly, the disclosure relates to recombinant microorganisms engineered to produce fatty diols via fermentation. Further encompassed is a process that uses the microorganisms to produce fatty diols from a simple carbon source.
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公开(公告)号:US20200332320A1
公开(公告)日:2020-10-22
申请号:US16866405
申请日:2020-05-04
Applicant: Genomatica, Inc.
Inventor: Robin E. Osterhout , Anthony P. Burgard , Mark J. Burk
IPC: C12P7/44 , C08G63/183 , C12N9/02 , C12N9/04 , C12N9/10 , C12N9/12 , C12N9/88 , C12P7/24 , C12P7/40 , C12P9/00 , C07F9/09 , C07C51/43 , C12P7/62
Abstract: The invention provides non-naturally occurring microbial organisms having a (2-hydroxy-3-methyl-4-oxobutoxy)phosphonate (2H3M4OP) pathway, p-toluate pathway, and/or terephthalate pathway. The invention additionally provides methods of using such organisms to produce 2H3M4OP, p-toluate or terephthalate. Also provided herein are processes for isolating bio-based aromatic carboxylic acid, in particular, p-toluic acid or terephthalic acid, from a culture medium, wherein the processes involve contacting the culture medium with sufficient carbon dioxide (CO2) to lower the pH of the culture medium to produce a precipitate comprised of the aromatic carboxylic acid.
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