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公开(公告)号:US20190211335A1
公开(公告)日:2019-07-11
申请号:US16334057
申请日:2017-09-27
发明人: Jinpeng Wang , Qin Yang , Qiang Gong
IPC分类号: C12N15/115
CPC分类号: C12N15/115 , C12N15/10 , C12N15/1093 , C12N2310/321 , C12N2310/322 , C12Q1/6811 , C12Q1/6834 , C40B10/00 , C40B30/04 , C40B40/06 , C12Q2525/101 , C12Q2525/205 , C12Q2563/149 , C12Q2565/525
摘要: The present disclosure provides compositions, methods and systems for generating nucleic acid agents having a desired property, such as a property for specifically binding to a target. More specifically, the present disclosure provides compositions, methods and systems for generating a pool of modified members comprising modified nucleic acid agents with an unlimited range of chemical diversity.
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公开(公告)号:US20170362641A1
公开(公告)日:2017-12-21
申请号:US15689120
申请日:2017-08-29
发明人: Elazar RABBANI , James J. Donegan
IPC分类号: C12Q1/68
CPC分类号: C12Q1/6809 , C12Q1/6813 , C12Q1/6844 , C12Q2565/525 , C12Q2565/501 , C12Q2531/143
摘要: This invention provides methods for characterizing the amounts of nucleic acids, including plus/minus determinations, the use of different constructs, the use of a library and a reference library. Expression may also be compared in two or more samples using the methods of this invention. Also provided are heterophasic arrays comprising labeled positive copies of nucleic acids hybridized to the array and labeled negative copies of nucleic acids hybridized to the array, in which the labeled positive copies are separately quantifiable from the labeled negative copies.
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公开(公告)号:US09765391B2
公开(公告)日:2017-09-19
申请号:US11989170
申请日:2006-07-20
CPC分类号: C12Q1/6869 , C12Q1/6853 , C12Q2565/525 , C12Q2533/101 , C12Q2525/119 , C12Q2525/301 , C12Q2535/119 , C12Q2565/537
摘要: The invention relates to methods for pairwise sequencing of a polynucleotide template which result in the sequential determination of nucleotide sequence in two distinct and separate regions of the polynucleotide template.
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公开(公告)号:US09217144B2
公开(公告)日:2015-12-22
申请号:US13520383
申请日:2011-01-06
申请人: Joseph Jacobson , Larry Li-Yang Chu
发明人: Joseph Jacobson , Larry Li-Yang Chu
CPC分类号: B01J19/0046 , B01J2219/00608 , B01J2219/00722 , C12N15/1031 , C12Q1/6811 , C12Q1/6837 , C12Q2565/525 , C12Q2525/301
摘要: Methods and apparatus relate to the synthesis of high fidelity polynucleotides and to the reduction of sequence errors generated during synthesis of nucleic acids on a solid support. Specifically, design of support-bound template oligonucleotides is disclosed. Assembly methods include cycles of annealing, stringent wash and extension of polynucleotides comprising a sequence region complementary to immobilized template oligonucleotides. The error free synthetic nucleic acids generated therefrom can be used for a variety of applications, including synthesis of biofuels and value-added pharmaceutical products.
摘要翻译: 方法和装置涉及高保真多核苷酸的合成和降低在固体支持物上核酸合成过程中产生的序列错误。 具体地,公开了载体结合的模板寡核苷酸的设计。 组装方法包括退火循环,严格洗涤和延伸包含与固定化模板寡核苷酸互补的序列区的多核苷酸。 由此产生的无错误的合成核酸可用于各种应用,包括合成生物燃料和增值药物产品。
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5.
公开(公告)号:US09194007B2
公开(公告)日:2015-11-24
申请号:US12445099
申请日:2007-10-12
IPC分类号: C07H21/04 , G01N33/542 , G01N33/533 , G01N33/53 , G01N21/76 , G01N21/00 , G01N33/566 , C12Q1/68 , C12M1/36 , C12M1/34 , C12P7/12 , C12Q1/70
CPC分类号: C12Q1/706 , C12Q1/6818 , C12Q1/6844 , C12Q1/703 , Y02A50/59 , C12Q2565/525 , C12Q2537/161 , C12Q2525/161 , C12Q2561/12 , C12Q2561/113 , C12Q2531/113
摘要: The present invention relates to a double-stranded probe intended for the fluorescent detection of at least one single-stranded or double-stranded target nucleic acid, comprising: —a first strand of formula X1-(L1)a-S1-S′1-(L′1)b-Y1 intended for the detection of a first strand of the target nucleic acid which comprises a sequence of formula T′1-T1; —a second strand of formula X2-(L2)c-S2-S′2-(L′2)d-Y2 intended for the detection of a second strand of the target nucleic acid, if present, the second strand of the target nucleic acid comprising a sequence of formula T′2-T2; wherein two of X1, X2, Y1, and Y2 represent a fluorescent donor, while the two others represent a fluorescent acceptor, and X1 and Y2 can not both represent a fluorescent donor.
摘要翻译: 本发明涉及用于荧光检测至少一种单链或双链靶核酸的双链探针,包括: - 式X1-(L1)a-S1-S'1的第一链 - (L'1)b-Y1,用于检测包含式T'1-T1序列的靶核酸的第一链; - 式X2-(L2)c-S2-S'2-(L'2)d-Y2的第二链,其用于检测靶核酸的第二链(如果存在)靶的第二链 包含式T'2-T2的序列的核酸; 其中X1,X2,Y1和Y2中的两个表示荧光供体,而另外两个表示荧光受体,X1和Y2不能都表示荧光供体。
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公开(公告)号:US08530638B2
公开(公告)日:2013-09-10
申请号:US12824983
申请日:2010-06-28
CPC分类号: C12Q1/6876 , C12Q1/6837 , C12Q2600/158 , C12Q2565/525
摘要: The disclosure features a collection that comprises a plurality of polymers, typically nucleic acid molecules in a compact form. The molecules include all possible sequences or at least a certain percentage of all possible sequences, of a particular length.
摘要翻译: 本公开的特征在于包含多个聚合物的集合,通常是紧密形式的核酸分子。 分子包括具有特定长度的所有可能序列或至少一定百分比的所有可能序列。
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7.
公开(公告)号:US20120231551A1
公开(公告)日:2012-09-13
申请号:US12845640
申请日:2010-07-28
CPC分类号: C12Q1/6837 , C12Q1/6834 , C12Q2565/525 , C12Q2565/501 , C12Q2525/301
摘要: Kits, reaction mixtures and methods for separating a target nucleic acid from a sample by using at least one hairpin capture probe oligonucleotide that has the structure 5′-X.sub.n a′ b′ c′ Y.sub.n-3′, wherein X and Y each comprise nucleic acid sequences that can form a double stranded stem portion, one of X or Y is a capture sequence that is a first member of a specific binding pair and the other of X or Y is a terminal sequence of the hairpin capture probe, and a′ b′ c′ comprises a target-complementary sequence flanked by X and Y to thereby form a loop portion of the hairpin, thus forming a capture hybrid that is separated from other sample components before the target nucleic acid is released from the capture support and hybridized to a detection probe that hybridizes specifically to the same sequence that is at least partially hybridized by the a′ b′ c′ portion of the capture probe, thus forming a detectable detection hybrid to indicate the presence of the target nucleic acid in the sample.
摘要翻译: 试剂盒,反应混合物和通过使用至少一种具有结构5'-XbaI'b'c'Y-3'的发夹捕获探针寡核苷酸从样品中分离靶核酸的方法, 其中X和Y各自包含可以形成双链茎部分的核酸序列,X或Y之一是作为特异性结合对的第一个成员的捕获序列,X或Y中的另一个是末端序列 发夹捕获探针,并且'b'c'包含侧翼为X和Y的靶互补序列,从而形成发夹的环部分,从而形成捕获杂交体,其在靶核酸为靶标之前与其它样品组分分离 从捕获载体释放并与检测探针杂交,所述检测探针特异性与与捕获探针的'b'c'部分至少部分杂交的相同序列杂交,从而形成可检测的检测杂交体以指示存在 柏油 得到样品中的核酸。
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8.
公开(公告)号:US20110250599A1
公开(公告)日:2011-10-13
申请号:US13087282
申请日:2011-04-14
IPC分类号: C12Q1/68 , G01N33/569 , C07H21/00 , G01N33/53
CPC分类号: C12Q1/6837 , C12Q1/6834 , C12Q2565/525 , C12Q2565/501 , C12Q2525/301
摘要: Methods of the invention separate a target nucleic acid from a sample by using at least one capture probe oligonucleotide that contains a target-complementary region and a member of a specific binding pair that attaches the target nucleic acid to an immobilized probe on a capture support, thus forming a capture hybrid that is separated from other sample components before the target nucleic acid is released from the capture support and hybridized to a detection probe to form a detection hybrid that produces a detectable signal that indicates the presence of the target nucleic acid in the sample. Compositions for practicing the methods of the invention include a capture probe oligonucleotide made up a target-complementary region sequence and a covalently linked capture region sequence that includes a member of a specific binding pair.
摘要翻译: 本发明的方法通过使用至少一种包含靶互补区的捕获探针寡核苷酸和将靶核酸附着在捕获载体上的固定化探针上的特异性结合对的成员来分离目标核酸, 从而形成在靶核酸从捕获载体释放之前与其它样品组分分离的捕获杂交物,并与检测探针杂交以形成检测杂交体,其产生可检测信号,其指示靶核酸存在于 样品。 用于实施本发明方法的组合物包括构成靶互补区序列的捕获探针寡核苷酸和包含特异性结合对成员的共价连接的捕获区序列。
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公开(公告)号:US07820387B2
公开(公告)日:2010-10-26
申请号:US11926120
申请日:2007-10-28
申请人: Bruce P. Neri , Jeff G. Hall , Victor Lyamichev , Lloyd M. Smith
发明人: Bruce P. Neri , Jeff G. Hall , Victor Lyamichev , Lloyd M. Smith
IPC分类号: C12Q1/68
CPC分类号: C12N9/22 , C12Q1/6823 , C12Q1/6827 , Y10S435/81 , Y10S435/822 , C12Q2565/525 , C12Q2561/109 , C12Q2525/301
摘要: The present invention relates to compositions and methods for the detection and characterization of nucleic acid sequences and variations in nucleic acid sequences. The present invention relates to methods for forming a nucleic acid cleavage structure on a solid support and cleaving the nucleic acid cleavage structure in a site-specific manner. For example, in some embodiments, a 5′ nuclease activity from any of a variety of enzymes is used to cleave the target-dependent cleavage structure, thereby indicating the presence of specific nucleic acid sequences or specific variations thereof.
摘要翻译: 本发明涉及核酸序列的检测和表征的组合物和方法以及核酸序列的变化。 本发明涉及在固体支持物上形成核酸切割结构并以位点特异性方式切割核酸切割结构的方法。 例如,在一些实施方案中,使用来自任何多种酶的5'核酸酶活性来切割靶依赖性切割结构,从而指示特异性核酸序列的存在或其特定变体。
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公开(公告)号:US20090311673A1
公开(公告)日:2009-12-17
申请号:US11931178
申请日:2007-10-31
CPC分类号: C12Q1/686 , B01L3/5082 , B01L7/52 , B01L2300/0654 , B01L2300/0838 , B01L2300/1844 , C12Q1/6818 , C12Q1/6823 , G01N21/0303 , G01N21/07 , G01N21/253 , G01N21/6428 , G01N21/6452 , G01N35/025 , G01N2021/6417 , G01N2021/6482 , G01N2035/00237 , Y10T436/143333 , C12Q2561/113 , C12Q2531/113 , C12Q2527/107 , C12Q2565/525 , C12Q2563/107 , C12Q2565/101
摘要: The present invention is directed to devices for performing PCR and monitoring the reaction of a sample comprising a nucleic acid and a fluorescent dye. Illustrative devices comprise a heat exchange component for heating and cooling the sample, a control device for repeatedly operating the heat exchange component to subject the sample to thermal cycling, an excitation source for optically exciting the sample to cause the sample to fluoresce, a photodetector for detecting temperature-dependent fluorescence levels from the sample, and a processor configured to record and process emissions from the fluorescent dye.
摘要翻译: 本发明涉及用于进行PCR和监测包含核酸和荧光染料的样品的反应的装置。 示例性装置包括用于加热和冷却样品的热交换部件,用于重复操作热交换部件以使样品经受热循环的控制装置,用于光学激发样品以引起样品发荧光的激发源, 检测来自样品的温度依赖性荧光水平,以及被配置为记录和处理来自荧光染料的发射的处理器。
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