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公开(公告)号:US20080040045A1
公开(公告)日:2008-02-14
申请号:US11973805
申请日:2007-10-09
申请人: Sergey Selifonov , Willem Stemmer
发明人: Sergey Selifonov , Willem Stemmer
IPC分类号: G01N33/48
摘要: In particular, this invention provides novel methods of populating data structures for use in evolutionary modeling. In particular, this invention provides methods of populating a data structure with a plurality of character strings. The methods involve encoding two or more a biological molecules into character strings to provide a collection of two or more different initial character strings; selecting at least two substrings from the pool of character strings; concatenating the substrings to form one or more product strings about the same length as one or more of the initial character strings; adding the product strings to a collection of strings; and optionally repeating this process using one or more of the product strings as an initial string in the collection of initial character strings.
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公开(公告)号:US20070191272A1
公开(公告)日:2007-08-16
申请号:US11528927
申请日:2006-09-27
CPC分类号: G01N33/6845 , C07K14/001 , C07K14/415 , C12N15/1044
摘要: The present invention provides cysteine-containing scaffolds and/or proteins, expression vectors, host cell and display systems harboring and/or expressing such cysteine-containing products. The present invention also provides methods of designing libraries of such products, methods of screening such libraries to yield entities exhibiting binding specificities towards a target molecule. Further provided by the invention are pharmaceutical compositions comprising the cysteine-containing products of the present invention.
摘要翻译: 本发明提供含半胱氨酸的支架和/或蛋白质,表达载体,宿主细胞和含有和/或表达这种含半胱氨酸的产品的显示系统。 本发明还提供了设计这样的产物的文库的方法,筛选这些文库以产生显示针对目标分子的结合特异性的实体的方法。 本发明进一步提供的是包含本发明的含半胱氨酸的产品的药物组合物。
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33.
公开(公告)号:US20070092887A1
公开(公告)日:2007-04-26
申请号:US11405038
申请日:2006-04-14
申请人: Willem Stemmer , Andreas Crameri
发明人: Willem Stemmer , Andreas Crameri
CPC分类号: C12N15/1058 , C07K14/43595 , C07K14/545 , C07K16/00 , C07K2317/565 , C07K2317/622 , C12N9/2471 , C12N9/86 , C12N15/1027 , C12N15/1037 , C12N15/52 , C12N15/64 , C12Q1/68 , C12Q1/6811 , C12Y302/01023 , C40B40/02 , Y10S435/876
摘要: A method for DNA reassembly after random fragmentation, and its application to mutagenesis of nucleic acid sequences by in vitro or in vivo recombination is described. In particular, a method for the production of nucleic acid fragments or polynucleotides encoding mutant proteins is described. The present invention also relates to a method of repeated cycles of mutagenesis, shuffling and selection which allow for the directed molecular evolution in vitro or in vivo of proteins.
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公开(公告)号:US20060257890A1
公开(公告)日:2006-11-16
申请号:US11350407
申请日:2006-02-07
申请人: Jeremy Minshull , Willem Stemmer
发明人: Jeremy Minshull , Willem Stemmer
CPC分类号: C12N15/1027 , C12N15/1058
摘要: The present invention is generally directed to the evolution of new metabolic pathways and the enhancement of bioprocessing through a process herein termed recursive sequence recombination. Recursive sequence recombination entails performing iterative cycles of recombination and screening or selection to “evolve” individual genes, whole plasmids or viruses, multigene clusters, or even whole genomes. Such techniques do not require the extensive analysis and computation required by conventional methods for metabolic engineering.
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公开(公告)号:US20060253923A1
公开(公告)日:2006-11-09
申请号:US11436796
申请日:2006-05-17
CPC分类号: C12N9/1092 , C12N9/0004 , C12N9/0073 , C12N15/1027 , C12N15/8275
摘要: Methods of shuffling DNA to obtain recombinant herbicide tolerance nucleic acids encoding proteins having new or improved herbicide tolerance activities, libraries of shuffled herbicide tolerance nucleic acids, transgenic plants and DNA shuffling mixtures are provided.
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公开(公告)号:US20060177831A1
公开(公告)日:2006-08-10
申请号:US11155989
申请日:2005-06-17
申请人: Willem Stemmer , D. Perlroth , Sanjeev Satyal , Benjamin Alba , Alice Bakker , Amy Duguay , Qiang Liu , Joshua Silverman , Richard Smith , Candace Swimmer
发明人: Willem Stemmer , D. Perlroth , Sanjeev Satyal , Benjamin Alba , Alice Bakker , Amy Duguay , Qiang Liu , Joshua Silverman , Richard Smith , Candace Swimmer
IPC分类号: C12P21/02 , C12Q1/68 , C07K14/705 , C07K16/28
CPC分类号: C07K14/47 , A61K38/00 , C07K14/705 , G01N33/566 , G01N33/574 , G01N2333/4753 , G01N2333/82 , G01N2500/00
摘要: Polypeptides comprising monomer domains that bind to c-MET, or portions thereof, are provided.
摘要翻译: 提供了包含与c-MET结合的单体结构域的多肽或其部分。
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公开(公告)号:US20050064464A1
公开(公告)日:2005-03-24
申请号:US10877035
申请日:2004-06-25
申请人: Juha Punnonen , Willem Stemmer , Robert Whalen , Russell Howard
发明人: Juha Punnonen , Willem Stemmer , Robert Whalen , Russell Howard
IPC分类号: A61K39/00 , C07K14/02 , C07K14/16 , C07K14/24 , C12N15/10 , C40B40/02 , C12Q1/68 , A61K48/00 , C12P19/34
CPC分类号: C40B40/02 , A61K39/00 , A61K2039/53 , C07K14/005 , C07K14/24 , C07K2319/02 , C07K2319/40 , C07K2319/74 , C12N15/1027 , C12N15/1034 , C12N15/1037 , C12N15/1093 , C12N2730/10122 , C12N2740/16222
摘要: This invention provides methods for obtaining molecules that can modulate an immune response, and immunomodulatory molecules obtained using the methods. The molecules find use, for example, in the tailoring of an immune response induced by a genetic vaccine for a desired purpose.
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公开(公告)号:US20050060767A1
公开(公告)日:2005-03-17
申请号:US10627449
申请日:2003-07-25
IPC分类号: A01H1/00 , C12N1/20 , C12N1/21 , C12N5/10 , C12N9/02 , C12N9/10 , C12N15/01 , C12N15/09 , C12N15/10 , C12N15/82 , C12Q1/02 , C12R1/19 , C12R1/91
CPC分类号: C12N9/1092 , C12N9/0004 , C12N9/0073 , C12N15/1027 , C12N15/8275
摘要: Methods of shuffling DNA to obtain recombinant herbicide tolerance nucleic acids encoding proteins having new or improved herbicide tolerance activities, libraries of shuffled herbicide tolerance nucleic acids, transgenic plants and DNA shuffling mixtures are provided.
摘要翻译: 提供了用于混合DNA以获得编码具有新的或改进的除草剂耐受活性的蛋白质的重组除草剂耐受性核酸的方法,洗牌的除草剂耐受性核酸的文库,转基因植物和DNA混洗混合物。
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39.
公开(公告)号:US20080050782A1
公开(公告)日:2008-02-28
申请号:US11975638
申请日:2007-10-18
申请人: Sergey Selifonov , Willem Stemmer , Claes Gustafsson , Matthew Tobin , Stephen Cardayre , Phillip Patten , Jeremy Minshull , Lorraine Giver
发明人: Sergey Selifonov , Willem Stemmer , Claes Gustafsson , Matthew Tobin , Stephen Cardayre , Phillip Patten , Jeremy Minshull , Lorraine Giver
摘要: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided.
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公开(公告)号:US20080039341A1
公开(公告)日:2008-02-14
申请号:US11715276
申请日:2007-03-06
申请人: Volker Schellenberger , Willem Stemmer , Chia-wei Wang , Michael Scholle , Mikhail Popkov , Nathaniel Gordon , Andreas Crameri
发明人: Volker Schellenberger , Willem Stemmer , Chia-wei Wang , Michael Scholle , Mikhail Popkov , Nathaniel Gordon , Andreas Crameri
CPC分类号: C07K14/56 , A61K38/00 , C07K7/06 , C07K7/08 , C07K14/001 , C07K14/415 , C07K14/47 , C07K14/53 , C07K14/535 , C07K14/61 , C07K2319/31 , C07K2319/35 , C12N15/1044 , G01N33/6845
摘要: The present invention provides unstructured recombinant polymers (URPs) and proteins containing one or more of the URPs. The present invention also provides microproteins, toxins and other related proteinaceous entities, as well as genetic packages displaying these entities. The present invention also provides recombinant polypeptides including vectors encoding the subject proteinaceous entities, as well as host cells comprising the vectors. The subject compositions have a variety of utilities including a range of pharmaceutical applications.
摘要翻译: 本发明提供非结构化重组聚合物(URP)和含有一种或多种URP的蛋白质。 本发明还提供微蛋白,毒素和其它相关的蛋白质实体,以及显示这些实体的遗传包。 本发明还提供重组多肽,包括编码受试蛋白质实体的载体,以及包含载体的宿主细胞。 主题组合物具有各种实用性,包括一系列药物应用。
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