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公开(公告)号:US11773436B2
公开(公告)日:2023-10-03
申请号:US17091639
申请日:2020-11-06
发明人: Christina Chang , Margaret Nakamoto
IPC分类号: C12Q1/6806 , C12Q1/6865 , C12Q1/6867 , C12Q1/6874
CPC分类号: C12Q1/6865 , C12Q1/6867 , C12Q1/6874 , C12Q2521/101 , C12Q2521/107 , C12Q2565/1025
摘要: Disclosed herein include systems, methods, compositions, and kits for labeling nucleic acid targets in a sample. In some embodiments, nucleic acid targets (e.g., mRNAs) are initially barcoded on the 3′ end and are subsequently barcoded on the 5′ end following a template switching reaction and intermolecular and/or intramolecular hybridization and extension. 5′- and/or 3′-barcoded nucleic acid targets can serve as templates for amplification reactions and/or random priming and extension reactions to generate a sequencing library. The method can comprise generating a full-length sequence of the nucleic acid target by aligning a plurality of sequencing reads. Immune repertoire profiling methods are also provided in some embodiments.
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公开(公告)号:US20230111634A1
公开(公告)日:2023-04-13
申请号:US18052798
申请日:2022-11-04
发明人: Eli N. GLEZER , Andrew SPAVENTA , David BARKER
IPC分类号: C12Q1/6869 , C07H21/04 , C12Q1/6867
摘要: The present disclosure provides improved nucleic acid sequencing-by-synthesis (SBS) methods, related kits and reagents, and systems for performing such methods using such kits and reagents.
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公开(公告)号:US10982274B2
公开(公告)日:2021-04-20
申请号:US16249681
申请日:2019-01-16
发明人: Jan Berka , Yi-Ju Chen , John H. Leamon , Steven Lefkowitz , Kenton L. Lohman , Vinod B. Makhijani , Jonathan M. Rothberg , Gary J. Sarkis , Maithreyan Srinivasan , Michael P. Weiner
IPC分类号: C12Q1/68 , B01L3/00 , C07H21/00 , C12N15/10 , G01N21/25 , G01N21/64 , G01R33/12 , C12Q1/686 , C12Q1/6834 , C12Q1/6844 , C12Q1/6865 , C12Q1/6867 , C12Q1/6869 , C12Q1/6874 , C12Q1/6806 , B01L7/00
摘要: Disclosed are methods for nucleic acid amplification wherein nucleic acid templates, beads, and amplification reaction solution are emulsified and the nucleic acid templates are amplified to provide clonal copies of the nucleic acid templates attached to the beads. Also disclosed are kits and apparatuses for performing the methods of the invention.
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公开(公告)号:US20200263230A1
公开(公告)日:2020-08-20
申请号:US16740355
申请日:2020-01-10
发明人: Chunhong ZHOU , Sinan ARSLAN , Molly Min HE , Matthew KELLINGER , Adeline Huizhen MAH , Michael PREVITE , Lei SUN
IPC分类号: C12Q1/682 , C12Q1/6867 , C12Q1/6869
摘要: Methods and formulations for preparing low non-specific binding surfaces are described, and the prepared surface can provide improved performance for nucleic acid detection and base calling applications. The surface provides more accurate nucleic acid detection, enhanced contrast to noise ratio, and better data collection.
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公开(公告)号:US20190203263A1
公开(公告)日:2019-07-04
申请号:US16249681
申请日:2019-01-16
发明人: Jan Berka , Yi-Ju Chen , John H. Leamon , Steve Lefkowitz , Kenton L. Lohman , Vinod B. Makhijani , Jonathan M. Rothberg , Gary J. Sarkis , Maithreyan Srinivasan , Michael P. Weiner
IPC分类号: C12Q1/686 , C12Q1/6874 , C12N15/10 , B01L3/00 , G01N21/25 , G01N21/64 , C12Q1/6806 , G01R33/12 , C07H21/00 , C12Q1/6869 , C12Q1/6867 , C12Q1/6865 , C12Q1/6844 , C12Q1/6834
CPC分类号: C12Q1/686 , B01L3/5027 , B01L3/502707 , B01L3/502715 , B01L3/5085 , B01L7/52 , B01L2300/0636 , B01L2300/0819 , B01L2300/0877 , C07H21/00 , C12N15/1075 , C12N15/1093 , C12Q1/6806 , C12Q1/6834 , C12Q1/6844 , C12Q1/6865 , C12Q1/6867 , C12Q1/6869 , C12Q1/6874 , G01N21/253 , G01N21/6428 , G01N21/6452 , G01N21/6458 , G01N2021/6484 , G01R33/1269 , Y02P20/582 , Y10T436/143333 , C12Q2565/119 , C12Q2531/113 , C12Q2565/537 , C12Q2547/107 , C12Q2547/101 , C12Q2537/143 , C12Q2527/125 , C12Q2525/186 , C12Q2565/301 , C12Q2563/149 , C12Q2531/125 , C12Q2537/149 , C12Q2535/119
摘要: Disclosed are methods for nucleic acid amplification wherein nucleic acid templates, beads, and amplification reaction solution are emulsified and the nucleic acid templates are amplified to provide clonal copies of the nucleic acid templates attached to the beads. Also disclosed are kits and apparatuses for performing the methods of the invention.
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公开(公告)号:US20230416814A1
公开(公告)日:2023-12-28
申请号:US18457790
申请日:2023-08-29
发明人: Eli N. GLEZER , Andrew SPAVENTA , David BARKER
IPC分类号: C12Q1/6869 , C07H21/04 , C12Q1/6867
CPC分类号: C12Q1/6869 , C07H21/04 , C12Q1/6867 , C12Q2521/101 , C12Q2525/185 , C12Q2525/186 , C12Q2535/00
摘要: The present disclosure provides improved nucleic acid sequencing-by-synthesis (SBS) methods, related kits and reagents, and systems for performing such methods using such kits and reagents.
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公开(公告)号:US11773439B2
公开(公告)日:2023-10-03
申请号:US18052798
申请日:2022-11-04
发明人: Eli N. Glezer , Andrew Spaventa , David Barker
IPC分类号: C12Q1/6869 , C07H21/04 , C12Q1/6867
CPC分类号: C12Q1/6869 , C07H21/04 , C12Q1/6867 , C12Q2521/101 , C12Q2525/185 , C12Q2525/186 , C12Q2535/00
摘要: The present disclosure provides improved nucleic acid sequencing-by-synthesis (SBS) methods, related kits and reagents, and systems for performing such methods using such kits and reagents.
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8.
公开(公告)号:US20220315919A1
公开(公告)日:2022-10-06
申请号:US16758694
申请日:2018-10-25
申请人: SVAR Life Science AB
IPC分类号: C12N15/11 , C12N15/86 , C12Q1/6867 , C12Q1/6897
摘要: The present invention relates to small secreted reporter-peptides 15 to 150 amino-acids in length comprising a response element, activated by one or more transcription factors induced by the pharmacology active substance to be analyzed following its interaction with a specific intracellular or cell surface molecule, functionally linked to a response element, a TATA box, a signal peptide, anchor and detection sequences to which antibodies can be raised, and a poy-A tail. The anchor sequence may differ from one peptide to another or may be common to multiple secreted reporter-peptides such that all the peptides can be analyzed simultaneously by ELISA using a detection antibody labelled with for example HRP, or by the use of a commonly available immuno-detection platform such MSD, Gyros, AlphaLisa, or Biacore. The detection sequence is unique to each secreted reporter-peptide and may be labelled with a Sulfo-Tag that permits detection of the peptide on the MSD platform, or Alexa that permits detection on the Gyros platform, or digoxigenin that permits detection of on the PerkinElmer AlphaLISA platform, or left unlabeled for detection by SPR on a Biacore platform. The present invention provides i.a. a substantial improvement of cell-based assays for analysis using automated immune-detection platforms and allows simultaneous analysis of multiple analytes, multiple sampling from a single cell culture, and obviates the necessity to lyse cells and remove cell debris by centrifugation prior to analysis on an automated immuno-detection platform. The present invention also provides a means of increasing the dynamic range, sensitivity and reducing the cost of cell-based assays and can be applied to existing engineered cell lines, such as those containing a reporter- gene such as a luciferase reporter-gene obviating the necessity to extensively re-engineer cell lines containing multiple molecular constructs.
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公开(公告)号:US10253317B2
公开(公告)日:2019-04-09
申请号:US15321748
申请日:2015-06-30
发明人: Jong-Bum Lee , Yong-Kuk Park
IPC分类号: C12N15/113 , C12N15/64 , C12P19/34 , C12Q1/6844 , C12Q1/6853 , C12Q1/6867
摘要: Disclosed are particles which are introduced into target cells and suppress the expression of specific genes, and a method of manufacturing such particles. More particularly, the present invention relates to DNA-RNA hybrid particles that comprise a DNA strand and an RNA strand that binds to the DNA strand through partial complementary base pairing, in which the DNA strand comprises an aptamer sequence that is able to bind to a target protein produced in a target cell, and the RNA strand comprises an siRNA sequence that binds to a target RNA in the target cell to suppress protein expression from the target RNA. Such hybrid particles are capable of effectively delivering an siRNA therapeutic agent into target cells for the treatment of disease, and have resistance against digestion by in vivo nucleases, DNase and RNase, owing to complementary binding formed between DNA and RNA strands. Also, the present invention relates to a method of manufacturing such DNA-RNA hybrid particles.
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公开(公告)号:US11591647B2
公开(公告)日:2023-02-28
申请号:US16492076
申请日:2018-03-06
发明人: Eli Glezer , Andrew Spaventa , David Barker
IPC分类号: C12Q1/6869 , C07H21/04 , C12Q1/6867
摘要: The present disclosure provides improved nucleic acid sequencing-by-synthesis (SBS) methods, related kits and reagents, and systems for performing such methods using such kits and reagents.
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