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公开(公告)号:US12272048B2
公开(公告)日:2025-04-08
申请号:US17062907
申请日:2020-10-05
Applicant: Berkeley Lights, Inc.
Inventor: Fenglei Du , Paul M. Lundquist , John A. Tenney , Troy A. Lionberger
IPC: G06T7/00 , B01L3/00 , G01N15/00 , G01N15/01 , G01N15/10 , G01N15/14 , G01N15/1433 , G01N15/1434 , G01N21/05 , G01N21/17 , G01N21/64 , G01N27/453 , G06T5/50
Abstract: Methods are provided for the automated detection of micro-objects in a microfluidic device. In addition, methods are provided for repositioning micro-objects in a microfluidic device. In addition, methods are provided for separating micro-objects in a spatial region of the microfluidic device.
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公开(公告)号:US20230323433A1
公开(公告)日:2023-10-12
申请号:US18178927
申请日:2023-03-06
Applicant: Berkeley Lights, Inc.
Inventor: Matthew Asuka Kubit , Joshua David Mast , John Junyeon Kim , Alexander Gerald Olson , Preston Lock Ng , Arlvin Louis Ellefson , Shruthi Sreedhar Kubatur , Vincent Haw Tien Pai , Minha Park , Po-Yuan Tung , Jason C. Briggs , Patrick N. Ingram , Katrine Elise Dailey , Maryam Shansab , Jason M. McEwen , Adrienne T. Higa , Hongye Zhou , Zhen Hu , John A. Tenney
IPC: C12Q1/6834 , C12Q1/6844 , C12Q1/6804
CPC classification number: C12Q1/6834 , C12Q1/6804 , C12Q1/6844 , C12Q2600/16
Abstract: Disclosed herein are methods for performing assays, including general functional assays, on a biological cell. Also disclosed herein are methods of barcoding the 5′ ends of RNA from a biological cell and methods of preparation of expression constructs from the barcoded RNA. The barcoded RNA can encode proteins of interest, such as B cell receptor (BCR) heavy and light chain sequences. The expression constructs can be generated individually or in a paired/multiplexed manner, allowing rapid re-expression of individual proteins or protein complexes.
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公开(公告)号:US20230282313A1
公开(公告)日:2023-09-07
申请号:US17971400
申请日:2022-10-21
Applicant: BERKELEY LIGHTS, INC.
Inventor: Darshan Thaker , Keith J. Breinlinger , Vincent Haw Tien Pai , Christoph Andreas Neyer , Thomas M. Vetterli , Hayley M. Bennett , Elisabeth Marie Walczak , Alexander Gerald Olson , Wesley Arthur Zink , John A. Tenney , Oleksandr Tokmakov , Igor Fastnacht , Yuriy Nicheporuk , Andriy Koval , Khrystyna Andres , Alona Kostenko
CPC classification number: G16B40/20 , G16B45/00 , G16B30/20 , B01L3/502784 , G01N15/1463 , B01L2200/027
Abstract: Disclosed are methods, systems, and articles of manufacture for performing a process on biological samples. An analysis of biological samples in multiple regions of interest in a microfluidic device and a timeline correlated with the analysis may be identified. One or more region-of-interest types for the multiple regions of interest may be determined; and multiple characteristics may be determined for the biological samples based at least in part upon the one or more region-of-interest types. Associated data that respectively correspond to the multiple regions of interest in a user interface for at least a portion of the biological samples in the user interface based at least in part upon the multiple identifiers and the timeline. A count of the biological samples in a region of interest may be determined based at least in part upon a class or type of data using a convolutional neural network (CNN).
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公开(公告)号:US11376591B2
公开(公告)日:2022-07-05
申请号:US16893885
申请日:2020-06-05
Applicant: Berkeley Lights, Inc.
Inventor: Troy A. Lionberger , Brandon R. Bruhn , John A. Tenney , Eric D. Hobbs
IPC: B01L3/00 , G01N27/447 , B03C5/00 , B03C5/02
Abstract: Optically-actuated microfluidic devices permit the use of spatially-modulated light to manipulate micro-objects such as biological cells. Systems and methods are described for providing sequences of light patterns to move and direct a plurality of micro-objects within the environment of a microfluidic device. The sequenced light patterns provide improved efficiency in directing the transport of the plurality of micro-objects. Other embodiments are described.
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公开(公告)号:US11203018B2
公开(公告)日:2021-12-21
申请号:US16160816
申请日:2018-10-15
Applicant: Berkeley Lights, Inc.
Inventor: Troy A. Lionberger , Matthew E. Fowler , Phillip J. M. Elms , Kevin D. Loutherback , Randall D. Lowe, Jr. , Jian Gong , J. Tanner Nevill , Gang F. Wang , Gregory G. Lavieu , John A. Tenney , Aathavan Karunakaran , Anupam Singhal , I-Jong Lin
Abstract: Methods, systems and kits are described herein for detecting the results of an assay. In particular, the methods, systems and devices of the present disclosure rely on a difference between the diffusion rates of a reporter molecule and an analyte of interest in order to quantify an amount of analyte in a microfluidic device. The analyte may be a secreted product of a biological micro-object.
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公开(公告)号:US20210272654A1
公开(公告)日:2021-09-02
申请号:US17325196
申请日:2021-05-19
Applicant: BERKELEY LIGHTS, INC.
Inventor: Darshan Thaker , Keith J. Breinlinger , Vincent Haw Tien Pai , Christoph Andreas Neyer , Thomas M. Vetterli , Hayley M. Bennett , Elisabeth Marie Walczak , Alexander Gerald Olson , Wesley Arthur Zink , John A. Tenney , Oleksandr Tokmakov , Igor Fastnacht , Yuriy Nicheporuk , Andriy Koval , Khrystyna Andres , Alona Kostenko
Abstract: Disclosed are methods, systems, and articles of manufacture for performing a process on biological samples. An analysis of biological samples in multiple regions of interest in a microfluidic device and a timeline correlated with the analysis may be identified. One or more region-of-interest types for the multiple regions of interest may be determined; and multiple characteristics may be determined for the biological samples based at least in part upon the one or more region-of-interest types. Associated data that respectively correspond to the multiple regions of interest in a user interface for at least a portion of the biological samples in the user interface based at least in part upon the multiple identifiers and the timeline. A count of the biological samples in a region of interest may be determined based at least in part upon a class or type of data using a convolutional neural network (CNN).
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公开(公告)号:US10675625B2
公开(公告)日:2020-06-09
申请号:US15487795
申请日:2017-04-14
Applicant: Berkeley Lights, Inc.
Inventor: Troy A. Lionberger , Brandon R. Bruhn , John A. Tenney , Eric D. Hobbs
IPC: B01L3/00 , G01N27/447 , B03C5/00 , B03C5/02
Abstract: Optically-actuated microfluidic devices permit the use of spatially-modulated light to manipulate micro-objects such as biological cells. Systems and methods are described for providing sequences of light patterns to move and direct a plurality of micro-objects within the environment of a microfluidic device. The sequenced light patterns provide improved efficiency in directing the transport of the plurality of micro-objects. Other embodiments are described.
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公开(公告)号:US20190172196A1
公开(公告)日:2019-06-06
申请号:US16000385
申请日:2018-06-05
Applicant: Berkeley Lights, Inc.
Inventor: Fenglei Du , Paul M. Lundquist , John A. Tenney , Troy A. Lionberger
IPC: G06T7/00 , G01N21/64 , G01N15/14 , G06T5/50 , G01N27/453
CPC classification number: G06T7/0012 , B01L3/502761 , G01N15/1434 , G01N15/1463 , G01N15/1475 , G01N15/1484 , G01N21/6456 , G01N27/453 , G01N2015/0038 , G01N2015/0065 , G01N2015/1006 , G01N2015/1445 , G01N2015/1486 , G01N2015/1493 , G01N2015/1497 , G01N2021/056 , G01N2021/1765 , G01N2201/0635 , G01N2201/127 , G06T5/50 , G06T2207/30024 , G06T2207/30101
Abstract: Methods are provided for the automated detection of micro-objects in a microfluidic device. In addition, methods are provided for repositioning micro-objects in a microfluidic device. In addition, methods are provided for separating micro-objects in a spatial region of the microfluidic device.
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公开(公告)号:US09996920B2
公开(公告)日:2018-06-12
申请号:US14963230
申请日:2015-12-08
Applicant: Berkeley Lights, Inc.
Inventor: Fenglei Du , Paul M. Lundquist , John A. Tenney , Troy A. Lionberger
IPC: G06T7/00 , G01N15/14 , G06T5/50 , G01N27/453 , G01N21/64 , G01N15/00 , G01N15/10 , G01N21/05 , G01N21/17 , B01L3/00
CPC classification number: G06T7/0012 , B01L3/502761 , G01N15/1434 , G01N15/1463 , G01N15/1475 , G01N15/1484 , G01N21/6456 , G01N27/453 , G01N2015/0038 , G01N2015/0065 , G01N2015/1006 , G01N2015/1445 , G01N2015/1486 , G01N2015/1493 , G01N2015/1497 , G01N2021/056 , G01N2021/1765 , G01N2201/0635 , G01N2201/127 , G06T5/50 , G06T2207/30024 , G06T2207/30101
Abstract: Methods are provided for the automated detection of micro-objects in a microfluidic device. In addition, methods are provided for repositioning micro-objects in a microfluidic device. In addition, methods are provided for separating micro-objects in a spatial region of the microfluidic device.
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